Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 AC239800.4-201ENST00000603712 296 ntBASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 AL671710.1-201ENST00000610245 2349 ntBASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 FOXO1B-201ENST00000504678 1527 ntBASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 SPDYE7P-202ENST00000420373 878 ntBASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 AC107890.1-201ENST00000422478 521 ntBASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC24.18■■□□□ 1.46
CCDC144AA2RUR9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC24.17■■□□□ 1.46
CCDC144AA2RUR9 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC144AA2RUR9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC24.17■■□□□ 1.46
CCDC144AA2RUR9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC144AA2RUR9 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC144AA2RUR9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC144AA2RUR9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC24.17■■□□□ 1.46
CCDC144AA2RUR9 AL023806.1-201ENST00000603994 1649 ntBASIC24.17■■□□□ 1.46
CCDC144AA2RUR9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
CCDC144AA2RUR9 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC24.17■■□□□ 1.46
CCDC144AA2RUR9 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC24.17■■□□□ 1.46
CCDC144AA2RUR9 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC24.17■■□□□ 1.46
CCDC144AA2RUR9 KRT18P34-201ENST00000488218 1270 ntBASIC24.17■■□□□ 1.46
CCDC144AA2RUR9 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
CCDC144AA2RUR9 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC24.17■■□□□ 1.46
CCDC144AA2RUR9 AQP6-203ENST00000551733 849 ntTSL 3 BASIC24.17■■□□□ 1.46
CCDC144AA2RUR9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC144AA2RUR9 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC24.17■■□□□ 1.46
CCDC144AA2RUR9 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC24.17■■□□□ 1.46
CCDC144AA2RUR9 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 PCDHB17P-201ENST00000539533 2393 ntBASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 BAD-202ENST00000394531 631 ntTSL 3 BASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 COX20P2-201ENST00000452636 358 ntBASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 BAD-207ENST00000544785 525 ntTSL 3 BASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 AC140878.1-201ENST00000565277 250 ntBASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC24.16■■□□□ 1.46
CCDC144AA2RUR9 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC144AA2RUR9 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC24.15■■□□□ 1.46
CCDC144AA2RUR9 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC24.15■■□□□ 1.46
CCDC144AA2RUR9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
CCDC144AA2RUR9 AC139713.2-201ENST00000641328 2723 ntBASIC24.15■■□□□ 1.46
CCDC144AA2RUR9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC144AA2RUR9 AC020763.4-201ENST00000623414 4170 ntBASIC24.15■■□□□ 1.46
CCDC144AA2RUR9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC144AA2RUR9 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC144AA2RUR9 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC24.15■■□□□ 1.46
CCDC144AA2RUR9 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC24.15■■□□□ 1.46
CCDC144AA2RUR9 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
CCDC144AA2RUR9 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC24.15■■□□□ 1.46
CCDC144AA2RUR9 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC24.15■■□□□ 1.46
CCDC144AA2RUR9 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC24.15■■□□□ 1.46
CCDC144AA2RUR9 PPP6R2P1-201ENST00000450880 1275 ntBASIC24.15■■□□□ 1.46
CCDC144AA2RUR9 AC093214.1-201ENST00000511688 1107 ntBASIC24.15■■□□□ 1.46
CCDC144AA2RUR9 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC24.15■■□□□ 1.46
CCDC144AA2RUR9 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC144AA2RUR9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
CCDC144AA2RUR9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC144AA2RUR9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
CCDC144AA2RUR9 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
CCDC144AA2RUR9 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
CCDC144AA2RUR9 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CCDC144AA2RUR9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CCDC144AA2RUR9 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CCDC144AA2RUR9 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CCDC144AA2RUR9 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CCDC144AA2RUR9 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CCDC144AA2RUR9 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CCDC144AA2RUR9 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC24.14■■□□□ 1.45
CCDC144AA2RUR9 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC24.14■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms