Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 DUX4L17-201ENST00000557360 1267 ntBASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 AL031055.1-201ENST00000606362 631 ntBASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 AKAP8P1-201ENST00000434743 1349 ntBASIC15.17■□□□□ 0.02
TRGV5A0A0B4J1U4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 AL645939.2-201ENST00000427340 991 ntBASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 AC023141.5-201ENST00000458585 616 ntBASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 KRT8P48-201ENST00000515599 1220 ntBASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 AC109635.5-201ENST00000533593 962 ntBASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 AC124947.2-201ENST00000547118 1133 ntBASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 AC004449.1-201ENST00000564240 433 ntBASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 AL135744.1-201ENST00000565098 629 ntBASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.16■□□□□ 0.02
TRGV5A0A0B4J1U4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV5A0A0B4J1U4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV5A0A0B4J1U4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV5A0A0B4J1U4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV5A0A0B4J1U4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV5A0A0B4J1U4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV5A0A0B4J1U4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV5A0A0B4J1U4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
TRGV5A0A0B4J1U4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRGV5A0A0B4J1U4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRGV5A0A0B4J1U4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV5A0A0B4J1U4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.15■□□□□ 0.02
TRGV5A0A0B4J1U4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV5A0A0B4J1U4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV5A0A0B4J1U4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV5A0A0B4J1U4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV5A0A0B4J1U4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV5A0A0B4J1U4 RNU1-129P-201ENST00000384064 167 ntBASIC15.15■□□□□ 0.02
TRGV5A0A0B4J1U4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms