Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 RN7SL589P-201ENST00000481268 310 ntBASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 AC099522.2-201ENST00000607001 744 ntBASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1G3Q9Y6M4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 AC012313.1-201ENST00000593393 3059 ntBASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 SPDYE11-202ENST00000450699 704 ntBASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 TIMM8BP1-201ENST00000452384 211 ntBASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 SPDYE9P-201ENST00000570642 692 ntBASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 SPDYE10P-202ENST00000612005 668 ntBASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 SPDYE8P-202ENST00000612377 668 ntBASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 AL161645.1-201ENST00000622716 1255 ntBASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 AKAP8P1-201ENST00000434743 1349 ntBASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1G3Q9Y6M4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 AL627223.1-201ENST00000416693 442 ntBASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 AC011467.4-201ENST00000594891 528 ntBASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms