Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 AL353705.2-201ENST00000428243 662 ntBASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCH2Q9Y6C5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 PARP8-218ENST00000513738 596 ntTSL 4 BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 DOC2GP-202ENST00000514950 1163 ntBASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 RN7SL828P-201ENST00000607615 303 ntBASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 BICD1-207ENST00000551848 1962 ntBASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 FOXO1B-201ENST00000504678 1527 ntBASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
PTCH2Q9Y6C5 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 AL023806.1-201ENST00000603994 1649 ntBASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 KRT18P55-202ENST00000578578 1546 ntBASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 HLA-H-201ENST00000383620 1096 ntBASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 AC093004.1-201ENST00000508850 424 ntBASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 MIR4538-201ENST00000581377 78 ntBASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 COX11-210ENST00000639671 696 ntBASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 BTBD7P1-201ENST00000447253 1453 ntBASIC18.97■□□□□ 0.63
PTCH2Q9Y6C5 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms