Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 SPTSSB-204ENST00000617024 1292 ntBASIC21.37■■□□□ 1.01
CCNL1Q9UK58 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 OSM-203ENST00000403463 464 ntTSL 3 BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 RASL12-203ENST00000434605 982 ntTSL 2 BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 AC022210.1-201ENST00000449856 793 ntBASIC21.36■■□□□ 1.01
CCNL1Q9UK58 AC093004.1-201ENST00000508850 424 ntBASIC21.36■■□□□ 1.01
CCNL1Q9UK58 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 MIR4492-201ENST00000581627 80 ntBASIC21.36■■□□□ 1.01
CCNL1Q9UK58 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 AC007431.3-201ENST00000623221 587 ntBASIC21.36■■□□□ 1.01
CCNL1Q9UK58 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC21.36■■□□□ 1.01
CCNL1Q9UK58 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 SLC25A24-204ENST00000569674 2357 ntBASIC21.35■■□□□ 1.01
CCNL1Q9UK58 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 KRT8P49-201ENST00000604166 1432 ntBASIC21.35■■□□□ 1.01
CCNL1Q9UK58 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCNL1Q9UK58 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 AC092658.1-201ENST00000505836 891 ntBASIC21.34■■□□□ 1.01
CCNL1Q9UK58 MAX-210ENST00000555419 765 ntTSL 5 BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 AL138781.2-201ENST00000617896 1843 ntBASIC21.34■■□□□ 1.01
CCNL1Q9UK58 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
CCNL1Q9UK58 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNL1Q9UK58 AL023806.1-201ENST00000603994 1649 ntBASIC21.33■■□□□ 1.01
CCNL1Q9UK58 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CCNL1Q9UK58 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms