Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 AC002347.1-201ENST00000569543 541 ntBASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 AC023141.13-201ENST00000604991 943 ntBASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 KRT8P49-201ENST00000604166 1432 ntBASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SPHK1Q9NYA1 OR6D1P-202ENST00000641007 5290 ntBASIC16.33■□□□□ 0.21
SPHK1Q9NYA1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SPHK1Q9NYA1 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SPHK1Q9NYA1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.33■□□□□ 0.21
SPHK1Q9NYA1 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SPHK1Q9NYA1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
SPHK1Q9NYA1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 YBX2P1-201ENST00000394192 760 ntBASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 BX842568.4-201ENST00000421222 227 ntBASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 AC092865.5-201ENST00000545435 363 ntBASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 AL021920.2-201ENST00000624828 1351 ntBASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 SLC22A20-204ENST00000530038 1673 ntBASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.33■□□□□ 0.2
SPHK1Q9NYA1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 AC004832.2-201ENST00000426397 482 ntBASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms