Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
MKS1Q9NXB0 AC005052.1-201ENST00000625181 2492 ntBASIC16.78■□□□□ 0.28
MKS1Q9NXB0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MKS1Q9NXB0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.78■□□□□ 0.28
MKS1Q9NXB0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
MKS1Q9NXB0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
MKS1Q9NXB0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MKS1Q9NXB0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MKS1Q9NXB0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.78■□□□□ 0.28
MKS1Q9NXB0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MKS1Q9NXB0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
MKS1Q9NXB0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.78■□□□□ 0.28
MKS1Q9NXB0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MKS1Q9NXB0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MKS1Q9NXB0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MKS1Q9NXB0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 C8orf49-201ENST00000525043 1968 ntBASIC16.77■□□□□ 0.28
MKS1Q9NXB0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 AL136038.3-201ENST00000561909 1096 ntBASIC16.77■□□□□ 0.28
MKS1Q9NXB0 AL603832.2-201ENST00000566195 2125 ntBASIC16.77■□□□□ 0.28
MKS1Q9NXB0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.77■□□□□ 0.28
MKS1Q9NXB0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MKS1Q9NXB0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
MKS1Q9NXB0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.77■□□□□ 0.27
MKS1Q9NXB0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
MKS1Q9NXB0 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.77■□□□□ 0.27
MKS1Q9NXB0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MKS1Q9NXB0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
MKS1Q9NXB0 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.27
MKS1Q9NXB0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
MKS1Q9NXB0 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MKS1Q9NXB0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MKS1Q9NXB0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
MKS1Q9NXB0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
MKS1Q9NXB0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.77■□□□□ 0.27
MKS1Q9NXB0 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 AC093827.2-201ENST00000512654 315 ntBASIC16.76■□□□□ 0.27
MKS1Q9NXB0 AC022616.7-201ENST00000525383 220 ntBASIC16.76■□□□□ 0.27
MKS1Q9NXB0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 AC073592.4-201ENST00000623827 446 ntBASIC16.76■□□□□ 0.27
MKS1Q9NXB0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 SNX33P1-201ENST00000592116 1762 ntBASIC16.76■□□□□ 0.27
MKS1Q9NXB0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
MKS1Q9NXB0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms