Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FOXD4L1Q9NU39 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 AC008040.1-204ENST00000469301 1738 ntTSL 2 BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 MGST1-204ENST00000396209 979 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 PSG5-207ENST00000407568 1064 ntTSL 2 BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 RANP7-201ENST00000418085 644 ntBASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 AC011558.1-201ENST00000623459 338 ntBASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
FOXD4L1Q9NU39 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 SFR1P2-201ENST00000421841 730 ntBASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 AC093835.1-201ENST00000508072 568 ntTSL 4 BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 ZNF444P1-201ENST00000559497 298 ntBASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FOXD4L1Q9NU39 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXD4L1Q9NU39 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.58■□□□□ 0.88
FOXD4L1Q9NU39 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXD4L1Q9NU39 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXD4L1Q9NU39 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXD4L1Q9NU39 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.58■□□□□ 0.88
FOXD4L1Q9NU39 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
FOXD4L1Q9NU39 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXD4L1Q9NU39 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 PCDHA1-201ENST00000378133 2726 ntBASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 AL596275.1-201ENST00000423464 877 ntBASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD4L1Q9NU39 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms