Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.88■□□□□ 0.29
SSU72Q9NP77 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSU72Q9NP77 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.88■□□□□ 0.29
SSU72Q9NP77 AC005052.1-201ENST00000625181 2492 ntBASIC16.88■□□□□ 0.29
SSU72Q9NP77 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.88■□□□□ 0.29
SSU72Q9NP77 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSU72Q9NP77 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSU72Q9NP77 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSU72Q9NP77 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSU72Q9NP77 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SSU72Q9NP77 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SSU72Q9NP77 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSU72Q9NP77 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
SSU72Q9NP77 BX664615.1-201ENST00000443558 458 ntBASIC16.88■□□□□ 0.29
SSU72Q9NP77 HOMER2P1-201ENST00000455653 964 ntBASIC16.88■□□□□ 0.29
SSU72Q9NP77 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.88■□□□□ 0.29
SSU72Q9NP77 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.88■□□□□ 0.29
SSU72Q9NP77 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSU72Q9NP77 AC009533.2-201ENST00000543664 586 ntBASIC16.88■□□□□ 0.29
SSU72Q9NP77 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.88■□□□□ 0.29
SSU72Q9NP77 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSU72Q9NP77 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SSU72Q9NP77 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SSU72Q9NP77 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSU72Q9NP77 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSU72Q9NP77 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SSU72Q9NP77 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SSU72Q9NP77 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.88■□□□□ 0.29
SSU72Q9NP77 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSU72Q9NP77 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SSU72Q9NP77 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SSU72Q9NP77 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.88■□□□□ 0.29
SSU72Q9NP77 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSU72Q9NP77 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSU72Q9NP77 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SSU72Q9NP77 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.87■□□□□ 0.29
SSU72Q9NP77 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SSU72Q9NP77 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.87■□□□□ 0.29
SSU72Q9NP77 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SSU72Q9NP77 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SSU72Q9NP77 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.87■□□□□ 0.29
SSU72Q9NP77 ATP5G1P1-201ENST00000448724 379 ntBASIC16.87■□□□□ 0.29
SSU72Q9NP77 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SSU72Q9NP77 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SSU72Q9NP77 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSU72Q9NP77 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.87■□□□□ 0.29
SSU72Q9NP77 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.87■□□□□ 0.29
SSU72Q9NP77 AC139887.4-201ENST00000607877 719 ntBASIC16.87■□□□□ 0.29
SSU72Q9NP77 AL592071.1-201ENST00000611956 408 ntBASIC16.87■□□□□ 0.29
SSU72Q9NP77 AC073592.5-201ENST00000624854 528 ntBASIC16.87■□□□□ 0.29
SSU72Q9NP77 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.87■□□□□ 0.29
SSU72Q9NP77 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SSU72Q9NP77 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSU72Q9NP77 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSU72Q9NP77 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.87■□□□□ 0.29
SSU72Q9NP77 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSU72Q9NP77 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SSU72Q9NP77 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.87■□□□□ 0.29
SSU72Q9NP77 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SSU72Q9NP77 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSU72Q9NP77 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSU72Q9NP77 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSU72Q9NP77 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSU72Q9NP77 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
SSU72Q9NP77 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSU72Q9NP77 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSU72Q9NP77 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SSU72Q9NP77 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSU72Q9NP77 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.86■□□□□ 0.29
SSU72Q9NP77 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSU72Q9NP77 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.86■□□□□ 0.29
SSU72Q9NP77 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.86■□□□□ 0.29
SSU72Q9NP77 NUS1P1-201ENST00000446295 882 ntBASIC16.86■□□□□ 0.29
SSU72Q9NP77 AC112907.2-201ENST00000448639 330 ntBASIC16.86■□□□□ 0.29
SSU72Q9NP77 KRT18P38-201ENST00000449496 1282 ntBASIC16.86■□□□□ 0.29
SSU72Q9NP77 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.86■□□□□ 0.29
SSU72Q9NP77 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.86■□□□□ 0.29
SSU72Q9NP77 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.86■□□□□ 0.29
SSU72Q9NP77 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
SSU72Q9NP77 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SSU72Q9NP77 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.86■□□□□ 0.29
SSU72Q9NP77 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.86■□□□□ 0.29
SSU72Q9NP77 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.86■□□□□ 0.29
SSU72Q9NP77 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSU72Q9NP77 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SSU72Q9NP77 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SSU72Q9NP77 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSU72Q9NP77 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.86■□□□□ 0.29
SSU72Q9NP77 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSU72Q9NP77 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SSU72Q9NP77 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSU72Q9NP77 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.85■□□□□ 0.29
SSU72Q9NP77 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSU72Q9NP77 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.85■□□□□ 0.29
SSU72Q9NP77 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSU72Q9NP77 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSU72Q9NP77 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SSU72Q9NP77 GGT4P-201ENST00000623672 1708 ntBASIC16.85■□□□□ 0.29
SSU72Q9NP77 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSU72Q9NP77 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms