Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 AC109635.5-201ENST00000533593 962 ntBASIC19.75■□□□□ 0.75
SH2D4AQ9H788 AC025678.2-201ENST00000562061 970 ntBASIC19.75■□□□□ 0.75
SH2D4AQ9H788 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 AL009183.1-201ENST00000603760 355 ntBASIC19.75■□□□□ 0.75
SH2D4AQ9H788 AC093028.1-201ENST00000622998 982 ntBASIC19.75■□□□□ 0.75
SH2D4AQ9H788 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 AP001350.2-201ENST00000625104 1094 ntBASIC19.75■□□□□ 0.75
SH2D4AQ9H788 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH2D4AQ9H788 AC116353.5-201ENST00000638148 1699 ntBASIC19.75■□□□□ 0.75
SH2D4AQ9H788 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 TFAMP1-201ENST00000412727 736 ntBASIC19.74■□□□□ 0.75
SH2D4AQ9H788 AL627223.1-201ENST00000416693 442 ntBASIC19.74■□□□□ 0.75
SH2D4AQ9H788 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 HLA-J-203ENST00000494367 1087 ntBASIC19.74■□□□□ 0.75
SH2D4AQ9H788 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SH2D4AQ9H788 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.73■□□□□ 0.75
SH2D4AQ9H788 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4AQ9H788 AL021920.2-201ENST00000624828 1351 ntBASIC19.73■□□□□ 0.75
SH2D4AQ9H788 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4AQ9H788 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.73■□□□□ 0.75
SH2D4AQ9H788 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SH2D4AQ9H788 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4AQ9H788 AL139400.1-201ENST00000366220 510 ntBASIC19.73■□□□□ 0.75
SH2D4AQ9H788 SLC25A1P3-201ENST00000395415 828 ntBASIC19.73■□□□□ 0.75
SH2D4AQ9H788 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.73■□□□□ 0.75
SH2D4AQ9H788 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.73■□□□□ 0.75
SH2D4AQ9H788 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4AQ9H788 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4AQ9H788 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4AQ9H788 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SH2D4AQ9H788 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.73■□□□□ 0.75
SH2D4AQ9H788 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.73■□□□□ 0.75
SH2D4AQ9H788 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.73■□□□□ 0.75
SH2D4AQ9H788 AL135744.1-201ENST00000565098 629 ntBASIC19.73■□□□□ 0.75
SH2D4AQ9H788 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.73■□□□□ 0.75
SH2D4AQ9H788 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.73■□□□□ 0.75
SH2D4AQ9H788 AC106028.4-201ENST00000614509 607 ntBASIC19.73■□□□□ 0.75
SH2D4AQ9H788 AC009093.7-201ENST00000623853 1223 ntBASIC19.73■□□□□ 0.75
SH2D4AQ9H788 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4AQ9H788 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.73■□□□□ 0.75
SH2D4AQ9H788 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SH2D4AQ9H788 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4AQ9H788 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4AQ9H788 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH2D4AQ9H788 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH2D4AQ9H788 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SH2D4AQ9H788 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms