Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 HCG4B-203ENST00000450128 991 ntBASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 AC018845.2-201ENST00000568326 409 ntBASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 AC010654.1-201ENST00000615722 808 ntBASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 UBALD1-205ENST00000590891 2641 ntBASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CDCP1Q9H5V8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 MIR1233-2-201ENST00000408138 82 ntBASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 MIR1233-1-201ENST00000408722 82 ntBASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 AC139530.3-201ENST00000620344 690 ntBASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 AC022211.2-201ENST00000585075 2527 ntBASIC15.88■□□□□ 0.13
CDCP1Q9H5V8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 YBX2P1-201ENST00000394192 760 ntBASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 AC002347.1-201ENST00000569543 541 ntBASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 AC010327.4-202ENST00000591484 748 ntBASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDCP1Q9H5V8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms