Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK3Q9H422 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK3Q9H422 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK3Q9H422 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.45■□□□□ 0.54
HIPK3Q9H422 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.45■□□□□ 0.54
HIPK3Q9H422 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.45■□□□□ 0.54
HIPK3Q9H422 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK3Q9H422 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK3Q9H422 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK3Q9H422 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK3Q9H422 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.45■□□□□ 0.54
HIPK3Q9H422 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK3Q9H422 SPTLC1P1-201ENST00000447199 261 ntBASIC18.45■□□□□ 0.54
HIPK3Q9H422 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.45■□□□□ 0.54
HIPK3Q9H422 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HIPK3Q9H422 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.45■□□□□ 0.54
HIPK3Q9H422 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.45■□□□□ 0.54
HIPK3Q9H422 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.45■□□□□ 0.54
HIPK3Q9H422 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.45■□□□□ 0.54
HIPK3Q9H422 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.45■□□□□ 0.54
HIPK3Q9H422 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.45■□□□□ 0.54
HIPK3Q9H422 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.45■□□□□ 0.54
HIPK3Q9H422 AL138828.2-201ENST00000615812 383 ntBASIC18.45■□□□□ 0.54
HIPK3Q9H422 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK3Q9H422 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK3Q9H422 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.45■□□□□ 0.54
HIPK3Q9H422 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK3Q9H422 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK3Q9H422 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HIPK3Q9H422 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK3Q9H422 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK3Q9H422 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK3Q9H422 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK3Q9H422 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK3Q9H422 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK3Q9H422 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
HIPK3Q9H422 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HIPK3Q9H422 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIPK3Q9H422 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
HIPK3Q9H422 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIPK3Q9H422 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
HIPK3Q9H422 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIPK3Q9H422 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.44■□□□□ 0.54
HIPK3Q9H422 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
HIPK3Q9H422 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
HIPK3Q9H422 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.44■□□□□ 0.54
HIPK3Q9H422 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIPK3Q9H422 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HIPK3Q9H422 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIPK3Q9H422 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIPK3Q9H422 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HIPK3Q9H422 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
HIPK3Q9H422 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HIPK3Q9H422 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HIPK3Q9H422 AC142381.1-201ENST00000426099 345 ntBASIC18.44■□□□□ 0.54
HIPK3Q9H422 HLA-V-201ENST00000429037 534 ntBASIC18.44■□□□□ 0.54
HIPK3Q9H422 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.44■□□□□ 0.54
HIPK3Q9H422 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HIPK3Q9H422 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.44■□□□□ 0.54
HIPK3Q9H422 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.44■□□□□ 0.54
HIPK3Q9H422 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIPK3Q9H422 AC007967.4-201ENST00000614700 386 ntBASIC18.44■□□□□ 0.54
HIPK3Q9H422 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HIPK3Q9H422 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.44■□□□□ 0.54
HIPK3Q9H422 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIPK3Q9H422 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.44■□□□□ 0.54
HIPK3Q9H422 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.44■□□□□ 0.54
HIPK3Q9H422 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
HIPK3Q9H422 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIPK3Q9H422 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIPK3Q9H422 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HIPK3Q9H422 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIPK3Q9H422 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIPK3Q9H422 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIPK3Q9H422 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.43■□□□□ 0.54
HIPK3Q9H422 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HIPK3Q9H422 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIPK3Q9H422 CU639417.3-201ENST00000624240 1404 ntBASIC18.43■□□□□ 0.54
HIPK3Q9H422 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
HIPK3Q9H422 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIPK3Q9H422 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
HIPK3Q9H422 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIPK3Q9H422 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIPK3Q9H422 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
HIPK3Q9H422 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HIPK3Q9H422 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.43■□□□□ 0.54
HIPK3Q9H422 AC105233.2-201ENST00000523697 349 ntBASIC18.43■□□□□ 0.54
HIPK3Q9H422 AF228730.5-201ENST00000530288 346 ntBASIC18.43■□□□□ 0.54
HIPK3Q9H422 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.43■□□□□ 0.54
HIPK3Q9H422 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.43■□□□□ 0.54
HIPK3Q9H422 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.43■□□□□ 0.54
HIPK3Q9H422 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIPK3Q9H422 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.43■□□□□ 0.54
HIPK3Q9H422 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.43■□□□□ 0.54
HIPK3Q9H422 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.43■□□□□ 0.54
HIPK3Q9H422 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
HIPK3Q9H422 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.43■□□□□ 0.54
HIPK3Q9H422 AC020763.4-201ENST00000623414 4170 ntBASIC18.43■□□□□ 0.54
HIPK3Q9H422 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
HIPK3Q9H422 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms