Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 FRMD8P1-201ENST00000440433 1524 ntBASIC15.06■□□□□ 0
COMMD4Q9H0A8 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
COMMD4Q9H0A8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
COMMD4Q9H0A8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
COMMD4Q9H0A8 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COMMD4Q9H0A8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
COMMD4Q9H0A8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.05■□□□□ 0
COMMD4Q9H0A8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
COMMD4Q9H0A8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
COMMD4Q9H0A8 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.05■□□□□ 0
COMMD4Q9H0A8 AC026691.1-201ENST00000602502 2017 ntBASIC15.05■□□□□ 0
COMMD4Q9H0A8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.05■□□□□ 0
COMMD4Q9H0A8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
COMMD4Q9H0A8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.05■□□□□ 0
COMMD4Q9H0A8 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
COMMD4Q9H0A8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
COMMD4Q9H0A8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.05■□□□□ 0
COMMD4Q9H0A8 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
COMMD4Q9H0A8 AC046158.3-201ENST00000624947 2558 ntBASIC15.05■□□□□ 0
COMMD4Q9H0A8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
COMMD4Q9H0A8 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
COMMD4Q9H0A8 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
COMMD4Q9H0A8 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 AC003669.1-201ENST00000334569 611 ntBASIC15.05■□□□□ -0
COMMD4Q9H0A8 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 AC211429.1-201ENST00000415277 523 ntBASIC15.05■□□□□ -0
COMMD4Q9H0A8 KRT18P57-201ENST00000443599 1254 ntBASIC15.05■□□□□ -0
COMMD4Q9H0A8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.05■□□□□ -0
COMMD4Q9H0A8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.05■□□□□ -0
COMMD4Q9H0A8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.05■□□□□ -0
COMMD4Q9H0A8 AC011840.4-201ENST00000578471 627 ntBASIC15.05■□□□□ -0
COMMD4Q9H0A8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.05■□□□□ -0
COMMD4Q9H0A8 AL138831.2-201ENST00000606564 490 ntBASIC15.05■□□□□ -0
COMMD4Q9H0A8 AC006011.2-201ENST00000621313 1158 ntBASIC15.05■□□□□ -0
COMMD4Q9H0A8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.05■□□□□ -0
COMMD4Q9H0A8 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
COMMD4Q9H0A8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.05■□□□□ -0
COMMD4Q9H0A8 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 AL353593.2-201ENST00000602529 1483 ntBASIC15.05■□□□□ -0
COMMD4Q9H0A8 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
COMMD4Q9H0A8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
COMMD4Q9H0A8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.05■□□□□ -0
COMMD4Q9H0A8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
COMMD4Q9H0A8 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.05■□□□□ -0
COMMD4Q9H0A8 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.05■□□□□ -0
COMMD4Q9H0A8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
COMMD4Q9H0A8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.05■□□□□ -0
COMMD4Q9H0A8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COMMD4Q9H0A8 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.04■□□□□ -0
COMMD4Q9H0A8 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.04■□□□□ -0
COMMD4Q9H0A8 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
COMMD4Q9H0A8 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
COMMD4Q9H0A8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COMMD4Q9H0A8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.04■□□□□ -0
COMMD4Q9H0A8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COMMD4Q9H0A8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.04■□□□□ -0
COMMD4Q9H0A8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.04■□□□□ -0
COMMD4Q9H0A8 AC011270.2-201ENST00000624293 2550 ntBASIC15.04■□□□□ -0
COMMD4Q9H0A8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
COMMD4Q9H0A8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.04■□□□□ -0
COMMD4Q9H0A8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.04■□□□□ -0
COMMD4Q9H0A8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.04■□□□□ -0
COMMD4Q9H0A8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.04■□□□□ -0
COMMD4Q9H0A8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COMMD4Q9H0A8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.04■□□□□ -0
COMMD4Q9H0A8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.04■□□□□ -0
COMMD4Q9H0A8 AL356309.3-201ENST00000624132 1934 ntBASIC15.04■□□□□ -0
COMMD4Q9H0A8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.04■□□□□ -0
COMMD4Q9H0A8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
COMMD4Q9H0A8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.04■□□□□ -0
COMMD4Q9H0A8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.04■□□□□ -0
COMMD4Q9H0A8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COMMD4Q9H0A8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
COMMD4Q9H0A8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COMMD4Q9H0A8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
COMMD4Q9H0A8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.04■□□□□ -0
COMMD4Q9H0A8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.04■□□□□ -0
COMMD4Q9H0A8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COMMD4Q9H0A8 AK4P3-201ENST00000418260 669 ntBASIC15.04■□□□□ -0
COMMD4Q9H0A8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms