Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC099398.1-201ENST00000567919 2776 ntBASIC15.68■□□□□ 0.1
TRIM2Q9C040 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM2Q9C040 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRIM2Q9C040 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM2Q9C040 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM2Q9C040 AP005117.1-201ENST00000584346 1413 ntBASIC15.68■□□□□ 0.1
TRIM2Q9C040 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM2Q9C040 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM2Q9C040 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM2Q9C040 AC132008.2-207ENST00000454517 770 ntBASIC15.67■□□□□ 0.1
TRIM2Q9C040 EMBP1-201ENST00000458200 901 ntBASIC15.67■□□□□ 0.1
TRIM2Q9C040 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM2Q9C040 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM2Q9C040 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.67■□□□□ 0.1
TRIM2Q9C040 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM2Q9C040 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.67■□□□□ 0.1
TRIM2Q9C040 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRIM2Q9C040 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM2Q9C040 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM2Q9C040 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM2Q9C040 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
TRIM2Q9C040 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM2Q9C040 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRIM2Q9C040 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM2Q9C040 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM2Q9C040 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM2Q9C040 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM2Q9C040 LINC00982-205ENST00000420957 435 ntBASIC15.66■□□□□ 0.1
TRIM2Q9C040 PRYP5-201ENST00000451909 266 ntBASIC15.66■□□□□ 0.1
TRIM2Q9C040 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.66■□□□□ 0.1
TRIM2Q9C040 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM2Q9C040 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM2Q9C040 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRIM2Q9C040 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRIM2Q9C040 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRIM2Q9C040 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM2Q9C040 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TRIM2Q9C040 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM2Q9C040 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRIM2Q9C040 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRIM2Q9C040 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 AC004817.3-201ENST00000602957 2129 ntBASIC15.65■□□□□ 0.1
TRIM2Q9C040 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRIM2Q9C040 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRIM2Q9C040 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
TRIM2Q9C040 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms