Protein–RNA interactions for Protein: Q9BS92

NIPSNAP3B, Protein NipSnap homolog 3B, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3BQ9BS92 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 AC087499.1-201ENST00000418141 1075 ntBASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 CA15P1-201ENST00000481698 905 ntBASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 NAPSB-206ENST00000562112 1266 ntBASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 AP005242.2-201ENST00000580065 1175 ntBASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 LINC02012-201ENST00000608206 1725 ntBASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.66□□□□□ -0.22
NIPSNAP3BQ9BS92 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 AC046185.3-201ENST00000623228 1824 ntBASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 AL390955.1-201ENST00000428694 934 ntBASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 LINC01023-201ENST00000606054 436 ntBASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 AC133561.5-201ENST00000635547 218 ntBASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.65□□□□□ -0.22
NIPSNAP3BQ9BS92 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.23
NIPSNAP3BQ9BS92 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
NIPSNAP3BQ9BS92 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
NIPSNAP3BQ9BS92 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
NIPSNAP3BQ9BS92 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NIPSNAP3BQ9BS92 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.64□□□□□ -0.23
NIPSNAP3BQ9BS92 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.64□□□□□ -0.23
NIPSNAP3BQ9BS92 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.64□□□□□ -0.23
NIPSNAP3BQ9BS92 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NIPSNAP3BQ9BS92 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NIPSNAP3BQ9BS92 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NIPSNAP3BQ9BS92 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.64□□□□□ -0.23
NIPSNAP3BQ9BS92 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NIPSNAP3BQ9BS92 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
NIPSNAP3BQ9BS92 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
NIPSNAP3BQ9BS92 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
NIPSNAP3BQ9BS92 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NIPSNAP3BQ9BS92 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms