Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NPAS2Q99743 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.7■□□□□ 0.26
NPAS2Q99743 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS2Q99743 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS2Q99743 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS2Q99743 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS2Q99743 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS2Q99743 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
NPAS2Q99743 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.69■□□□□ 0.26
NPAS2Q99743 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS2Q99743 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS2Q99743 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.69■□□□□ 0.26
NPAS2Q99743 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS2Q99743 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
NPAS2Q99743 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NPAS2Q99743 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.69■□□□□ 0.26
NPAS2Q99743 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.69■□□□□ 0.26
NPAS2Q99743 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.69■□□□□ 0.26
NPAS2Q99743 AC005336.2-201ENST00000593183 939 ntBASIC16.69■□□□□ 0.26
NPAS2Q99743 BNIP3P18-201ENST00000593976 575 ntBASIC16.69■□□□□ 0.26
NPAS2Q99743 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.69■□□□□ 0.26
NPAS2Q99743 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.69■□□□□ 0.26
NPAS2Q99743 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS2Q99743 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS2Q99743 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS2Q99743 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS2Q99743 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS2Q99743 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
NPAS2Q99743 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.69■□□□□ 0.26
NPAS2Q99743 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS2Q99743 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS2Q99743 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS2Q99743 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS2Q99743 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS2Q99743 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.69■□□□□ 0.26
NPAS2Q99743 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS2Q99743 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
NPAS2Q99743 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS2Q99743 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
NPAS2Q99743 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS2Q99743 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.68■□□□□ 0.26
NPAS2Q99743 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
NPAS2Q99743 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS2Q99743 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.68■□□□□ 0.26
NPAS2Q99743 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS2Q99743 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS2Q99743 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS2Q99743 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.68■□□□□ 0.26
NPAS2Q99743 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS2Q99743 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
NPAS2Q99743 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.68■□□□□ 0.26
NPAS2Q99743 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
NPAS2Q99743 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.68■□□□□ 0.26
NPAS2Q99743 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NPAS2Q99743 VENTXP7-201ENST00000475503 772 ntBASIC16.68■□□□□ 0.26
NPAS2Q99743 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.68■□□□□ 0.26
NPAS2Q99743 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.68■□□□□ 0.26
NPAS2Q99743 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.68■□□□□ 0.26
NPAS2Q99743 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
NPAS2Q99743 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
NPAS2Q99743 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS2Q99743 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS2Q99743 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.68■□□□□ 0.26
NPAS2Q99743 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS2Q99743 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.68■□□□□ 0.26
NPAS2Q99743 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.68■□□□□ 0.26
NPAS2Q99743 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NPAS2Q99743 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS2Q99743 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NPAS2Q99743 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NPAS2Q99743 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS2Q99743 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
NPAS2Q99743 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NPAS2Q99743 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS2Q99743 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS2Q99743 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS2Q99743 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS2Q99743 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS2Q99743 AC004870.1-201ENST00000315132 882 ntBASIC16.67■□□□□ 0.26
NPAS2Q99743 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS2Q99743 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
NPAS2Q99743 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS2Q99743 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS2Q99743 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.67■□□□□ 0.26
NPAS2Q99743 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.67■□□□□ 0.26
NPAS2Q99743 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS2Q99743 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS2Q99743 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.67■□□□□ 0.26
NPAS2Q99743 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS2Q99743 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
NPAS2Q99743 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
NPAS2Q99743 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.67■□□□□ 0.26
NPAS2Q99743 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
NPAS2Q99743 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NPAS2Q99743 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS2Q99743 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS2Q99743 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS2Q99743 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS2Q99743 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS2Q99743 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms