Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 IGHV3-22-201ENST00000520721 359 ntBASIC14.25□□□□□ -0.13
CCL13Q99616 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.25□□□□□ -0.13
CCL13Q99616 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CCL13Q99616 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CCL13Q99616 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL13Q99616 AC004790.2-201ENST00000623588 572 ntBASIC14.25□□□□□ -0.13
CCL13Q99616 AF228730.7-201ENST00000641842 219 ntBASIC14.25□□□□□ -0.13
CCL13Q99616 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL13Q99616 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
CCL13Q99616 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL13Q99616 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL13Q99616 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL13Q99616 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.25□□□□□ -0.13
CCL13Q99616 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL13Q99616 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CCL13Q99616 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL13Q99616 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CCL13Q99616 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL13Q99616 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL13Q99616 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL13Q99616 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL13Q99616 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CCL13Q99616 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.24□□□□□ -0.13
CCL13Q99616 RPL13AP23-201ENST00000480739 586 ntBASIC14.24□□□□□ -0.13
CCL13Q99616 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.24□□□□□ -0.13
CCL13Q99616 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL13Q99616 AC124947.2-201ENST00000547118 1133 ntBASIC14.24□□□□□ -0.13
CCL13Q99616 MIR4751-201ENST00000578027 74 ntBASIC14.24□□□□□ -0.13
CCL13Q99616 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.24□□□□□ -0.13
CCL13Q99616 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 BX640515.1-201ENST00000617215 977 ntBASIC14.24□□□□□ -0.13
CCL13Q99616 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL13Q99616 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL13Q99616 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL13Q99616 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL13Q99616 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL13Q99616 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL13Q99616 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL13Q99616 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 AC104109.2-201ENST00000602919 1418 ntBASIC14.24□□□□□ -0.13
CCL13Q99616 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL13Q99616 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL13Q99616 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CCL13Q99616 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL13Q99616 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL13Q99616 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL13Q99616 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL13Q99616 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL13Q99616 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL13Q99616 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL13Q99616 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL13Q99616 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL13Q99616 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL13Q99616 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.23□□□□□ -0.13
CCL13Q99616 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL13Q99616 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL13Q99616 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL13Q99616 MRPL20P1-201ENST00000400819 433 ntBASIC14.23□□□□□ -0.13
CCL13Q99616 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL13Q99616 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCL13Q99616 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.23□□□□□ -0.13
CCL13Q99616 AC009947.1-201ENST00000444350 727 ntBASIC14.23□□□□□ -0.13
CCL13Q99616 AC087163.2-201ENST00000457299 853 ntBASIC14.23□□□□□ -0.13
CCL13Q99616 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CCL13Q99616 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.23□□□□□ -0.13
CCL13Q99616 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.23□□□□□ -0.13
CCL13Q99616 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL13Q99616 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL13Q99616 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL13Q99616 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCL13Q99616 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL13Q99616 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL13Q99616 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL13Q99616 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms