Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 FDX1P1-201ENST00000449115 551 ntBASIC16.55■□□□□ 0.24
PKP4Q99569 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.55■□□□□ 0.24
PKP4Q99569 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.55■□□□□ 0.24
PKP4Q99569 IGHV3-65-201ENST00000523210 341 ntBASIC16.55■□□□□ 0.24
PKP4Q99569 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PKP4Q99569 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.55■□□□□ 0.24
PKP4Q99569 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
PKP4Q99569 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.55■□□□□ 0.24
PKP4Q99569 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
PKP4Q99569 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PKP4Q99569 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PKP4Q99569 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PKP4Q99569 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PKP4Q99569 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PKP4Q99569 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PKP4Q99569 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PKP4Q99569 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PKP4Q99569 PCDHB17P-201ENST00000539533 2393 ntBASIC16.55■□□□□ 0.24
PKP4Q99569 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PKP4Q99569 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PKP4Q99569 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PKP4Q99569 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PKP4Q99569 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.54■□□□□ 0.24
PKP4Q99569 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PKP4Q99569 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PKP4Q99569 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PKP4Q99569 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PKP4Q99569 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PKP4Q99569 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PKP4Q99569 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PKP4Q99569 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PKP4Q99569 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PKP4Q99569 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PKP4Q99569 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PKP4Q99569 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.54■□□□□ 0.24
PKP4Q99569 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PKP4Q99569 SLC25A6P2-201ENST00000497974 877 ntBASIC16.54■□□□□ 0.24
PKP4Q99569 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PKP4Q99569 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.54■□□□□ 0.24
PKP4Q99569 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.54■□□□□ 0.24
PKP4Q99569 GGTLC5P-201ENST00000617623 998 ntBASIC16.54■□□□□ 0.24
PKP4Q99569 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.54■□□□□ 0.24
PKP4Q99569 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.54■□□□□ 0.24
PKP4Q99569 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
PKP4Q99569 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
PKP4Q99569 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PKP4Q99569 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PKP4Q99569 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PKP4Q99569 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
PKP4Q99569 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.54■□□□□ 0.24
PKP4Q99569 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PKP4Q99569 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PKP4Q99569 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.54■□□□□ 0.24
PKP4Q99569 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.54■□□□□ 0.24
PKP4Q99569 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PKP4Q99569 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PKP4Q99569 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PKP4Q99569 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PKP4Q99569 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PKP4Q99569 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.54■□□□□ 0.24
PKP4Q99569 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PKP4Q99569 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PKP4Q99569 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PKP4Q99569 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PKP4Q99569 AC002310.6-201ENST00000624451 1377 ntBASIC16.53■□□□□ 0.24
PKP4Q99569 AL021920.2-201ENST00000624828 1351 ntBASIC16.53■□□□□ 0.24
PKP4Q99569 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
PKP4Q99569 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PKP4Q99569 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.53■□□□□ 0.24
PKP4Q99569 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.53■□□□□ 0.24
PKP4Q99569 TUBB8P12-201ENST00000308911 1335 ntBASIC16.53■□□□□ 0.24
PKP4Q99569 TUBB7P-202ENST00000428444 1305 ntBASIC16.53■□□□□ 0.24
PKP4Q99569 TUBB8P7-204ENST00000567960 1332 ntBASIC16.53■□□□□ 0.24
PKP4Q99569 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PKP4Q99569 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PKP4Q99569 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
PKP4Q99569 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PKP4Q99569 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PKP4Q99569 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.53■□□□□ 0.24
PKP4Q99569 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.53■□□□□ 0.24
PKP4Q99569 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.53■□□□□ 0.24
PKP4Q99569 AC026396.1-201ENST00000419388 421 ntBASIC16.53■□□□□ 0.24
PKP4Q99569 AC079776.4-201ENST00000511039 504 ntBASIC16.53■□□□□ 0.24
PKP4Q99569 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.53■□□□□ 0.24
PKP4Q99569 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.53■□□□□ 0.24
PKP4Q99569 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.53■□□□□ 0.24
PKP4Q99569 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PKP4Q99569 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.53■□□□□ 0.24
PKP4Q99569 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.53■□□□□ 0.24
PKP4Q99569 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
PKP4Q99569 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PKP4Q99569 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PKP4Q99569 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PKP4Q99569 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.53■□□□□ 0.24
PKP4Q99569 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PKP4Q99569 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PKP4Q99569 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PKP4Q99569 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PKP4Q99569 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PKP4Q99569 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms