Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
YME1L1Q96TA2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
YME1L1Q96TA2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.14■□□□□ 0.5
YME1L1Q96TA2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
YME1L1Q96TA2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.14■□□□□ 0.5
YME1L1Q96TA2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
YME1L1Q96TA2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
YME1L1Q96TA2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
YME1L1Q96TA2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.14■□□□□ 0.5
YME1L1Q96TA2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 MIR3909-201ENST00000579518 119 ntBASIC18.14■□□□□ 0.49
YME1L1Q96TA2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
YME1L1Q96TA2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 SLC22A20-204ENST00000530038 1673 ntBASIC18.13■□□□□ 0.49
YME1L1Q96TA2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 AC004233.3-201ENST00000607794 1269 ntBASIC18.13■□□□□ 0.49
YME1L1Q96TA2 AL662799.1-202ENST00000614205 422 ntBASIC18.13■□□□□ 0.49
YME1L1Q96TA2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 TOP3BP1-201ENST00000420768 1380 ntBASIC18.13■□□□□ 0.49
YME1L1Q96TA2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 AC100757.3-201ENST00000622361 1406 ntBASIC18.13■□□□□ 0.49
YME1L1Q96TA2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 AC104581.1-202ENST00000635932 2618 ntBASIC18.13■□□□□ 0.49
YME1L1Q96TA2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.13■□□□□ 0.49
YME1L1Q96TA2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 CR383656.12-201ENST00000549567 513 ntBASIC18.12■□□□□ 0.49
YME1L1Q96TA2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 AL008721.1-201ENST00000609964 604 ntBASIC18.12■□□□□ 0.49
YME1L1Q96TA2 AC025048.6-201ENST00000634326 1161 ntBASIC18.12■□□□□ 0.49
YME1L1Q96TA2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms