Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMARCD1Q96GM5 AC131009.4-201ENST00000624048 1740 ntBASIC17.83■□□□□ 0.44
SMARCD1Q96GM5 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.83■□□□□ 0.44
SMARCD1Q96GM5 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SMARCD1Q96GM5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMARCD1Q96GM5 AC060834.1-201ENST00000443027 2032 ntBASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 AP001094.4-201ENST00000579008 2176 ntBASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 ALG1L5P-201ENST00000482043 771 ntBASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 AC112482.1-201ENST00000492080 688 ntBASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 AC006538.3-201ENST00000612495 578 ntBASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 AP001350.2-201ENST00000625104 1094 ntBASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCD1Q96GM5 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 HMGA1P7-201ENST00000406908 502 ntBASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 MKNK2P1-201ENST00000437526 628 ntBASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 AC005829.1-201ENST00000570002 483 ntBASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 AL078644.1-201ENST00000609881 752 ntBASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.81■□□□□ 0.44
SMARCD1Q96GM5 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 AC092919.2-201ENST00000623631 1645 ntBASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 HTR5BP-201ENST00000430851 1154 ntBASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 FAM58CP-201ENST00000435741 640 ntBASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 AC140658.5-201ENST00000438532 169 ntBASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
SMARCD1Q96GM5 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms