Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.31■□□□□ 0.36
RTP4Q96DX8 MTDHP4-201ENST00000600287 670 ntBASIC17.31■□□□□ 0.36
RTP4Q96DX8 AC008608.2-201ENST00000606089 416 ntBASIC17.31■□□□□ 0.36
RTP4Q96DX8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTP4Q96DX8 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTP4Q96DX8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
RTP4Q96DX8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTP4Q96DX8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.31■□□□□ 0.36
RTP4Q96DX8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.31■□□□□ 0.36
RTP4Q96DX8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTP4Q96DX8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTP4Q96DX8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTP4Q96DX8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTP4Q96DX8 SNX33P1-201ENST00000592116 1762 ntBASIC17.3■□□□□ 0.36
RTP4Q96DX8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTP4Q96DX8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.3■□□□□ 0.36
RTP4Q96DX8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RTP4Q96DX8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.3■□□□□ 0.36
RTP4Q96DX8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTP4Q96DX8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.3■□□□□ 0.36
RTP4Q96DX8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTP4Q96DX8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
RTP4Q96DX8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTP4Q96DX8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RTP4Q96DX8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTP4Q96DX8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.3■□□□□ 0.36
RTP4Q96DX8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTP4Q96DX8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTP4Q96DX8 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RTP4Q96DX8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTP4Q96DX8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTP4Q96DX8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTP4Q96DX8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.3■□□□□ 0.36
RTP4Q96DX8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTP4Q96DX8 AC079776.4-201ENST00000511039 504 ntBASIC17.3■□□□□ 0.36
RTP4Q96DX8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.3■□□□□ 0.36
RTP4Q96DX8 AF238378.1-201ENST00000526806 358 ntBASIC17.3■□□□□ 0.36
RTP4Q96DX8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.3■□□□□ 0.36
RTP4Q96DX8 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.3■□□□□ 0.36
RTP4Q96DX8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.3■□□□□ 0.36
RTP4Q96DX8 REXO1L3P-201ENST00000622202 1288 ntBASIC17.3■□□□□ 0.36
RTP4Q96DX8 AF228730.7-201ENST00000641842 219 ntBASIC17.3■□□□□ 0.36
RTP4Q96DX8 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.3■□□□□ 0.36
RTP4Q96DX8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.3■□□□□ 0.36
RTP4Q96DX8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTP4Q96DX8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTP4Q96DX8 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTP4Q96DX8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTP4Q96DX8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RTP4Q96DX8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
RTP4Q96DX8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTP4Q96DX8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.3■□□□□ 0.36
RTP4Q96DX8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.3■□□□□ 0.36
RTP4Q96DX8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTP4Q96DX8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTP4Q96DX8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.29■□□□□ 0.36
RTP4Q96DX8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.29■□□□□ 0.36
RTP4Q96DX8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RTP4Q96DX8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTP4Q96DX8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTP4Q96DX8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTP4Q96DX8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RTP4Q96DX8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RTP4Q96DX8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RTP4Q96DX8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTP4Q96DX8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTP4Q96DX8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RTP4Q96DX8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTP4Q96DX8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTP4Q96DX8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.29■□□□□ 0.36
RTP4Q96DX8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTP4Q96DX8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTP4Q96DX8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTP4Q96DX8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTP4Q96DX8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.29■□□□□ 0.36
RTP4Q96DX8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.29■□□□□ 0.36
RTP4Q96DX8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.29■□□□□ 0.36
RTP4Q96DX8 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.29■□□□□ 0.36
RTP4Q96DX8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.29■□□□□ 0.36
RTP4Q96DX8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTP4Q96DX8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
RTP4Q96DX8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTP4Q96DX8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.29■□□□□ 0.36
RTP4Q96DX8 MIR4492-201ENST00000581627 80 ntBASIC17.29■□□□□ 0.36
RTP4Q96DX8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTP4Q96DX8 AC025062.2-201ENST00000605477 670 ntBASIC17.29■□□□□ 0.36
RTP4Q96DX8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RTP4Q96DX8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.29■□□□□ 0.36
RTP4Q96DX8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
RTP4Q96DX8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTP4Q96DX8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTP4Q96DX8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.29■□□□□ 0.36
RTP4Q96DX8 ME2P1-201ENST00000426028 1970 ntBASIC17.29■□□□□ 0.36
RTP4Q96DX8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.29■□□□□ 0.36
RTP4Q96DX8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTP4Q96DX8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTP4Q96DX8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTP4Q96DX8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTP4Q96DX8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTP4Q96DX8 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms