Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCG3Q8WXD2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 AC008741.2-201ENST00000612792 3115 ntBASIC17.48■□□□□ 0.39
SCG3Q8WXD2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 FGFR3P6-201ENST00000457012 610 ntBASIC17.48■□□□□ 0.39
SCG3Q8WXD2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.48■□□□□ 0.39
SCG3Q8WXD2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.48■□□□□ 0.39
SCG3Q8WXD2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.48■□□□□ 0.39
SCG3Q8WXD2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 AP005117.1-201ENST00000584346 1413 ntBASIC17.47■□□□□ 0.39
SCG3Q8WXD2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 AP001269.4-201ENST00000609611 512 ntBASIC17.47■□□□□ 0.39
SCG3Q8WXD2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 PCDHA1-201ENST00000378133 2726 ntBASIC17.47■□□□□ 0.39
SCG3Q8WXD2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 IL9RP2-201ENST00000423948 1312 ntBASIC17.47■□□□□ 0.39
SCG3Q8WXD2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.47■□□□□ 0.39
SCG3Q8WXD2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 FLJ38576-201ENST00000623820 2459 ntBASIC17.46■□□□□ 0.39
SCG3Q8WXD2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.46■□□□□ 0.39
SCG3Q8WXD2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms