Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 AL445228.2-201ENST00000605589 952 ntBASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 AL020989.1-201ENST00000422979 469 ntBASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC44A1Q8WWI5 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 AC233702.3-201ENST00000578656 1387 ntBASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 BX276092.5-203ENST00000456199 560 ntBASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 KRT18P35-201ENST00000510488 1269 ntBASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 AC004817.3-201ENST00000602957 2129 ntBASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 AL121672.3-201ENST00000608644 468 ntBASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 AP000867.4-201ENST00000641616 219 ntBASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC44A1Q8WWI5 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms