Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 FAM197Y4-202ENST00000622692 608 ntBASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 AC073347.1-201ENST00000421633 2643 ntBASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 ABHD17AP1-201ENST00000358206 933 ntBASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SMIM4Q8WVI0 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 AC107956.1-201ENST00000494359 873 ntBASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 AC113410.3-201ENST00000623366 203 ntBASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 LINC00895-201ENST00000629028 1637 ntBASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms