Protein–RNA interactions for Protein: Q8TDX6

CSGALNACT1, Chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1Q8TDX6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSGALNACT1Q8TDX6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.46■□□□□ 0.39
CSGALNACT1Q8TDX6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSGALNACT1Q8TDX6 AC012569.1-201ENST00000591191 1524 ntBASIC17.46■□□□□ 0.39
CSGALNACT1Q8TDX6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
CSGALNACT1Q8TDX6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSGALNACT1Q8TDX6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CSGALNACT1Q8TDX6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CSGALNACT1Q8TDX6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.46■□□□□ 0.38
CSGALNACT1Q8TDX6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CSGALNACT1Q8TDX6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 RBPMS2P1-201ENST00000437762 623 ntBASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 UXT-AS1-201ENST00000590504 1525 ntBASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.45■□□□□ 0.38
CSGALNACT1Q8TDX6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 MIR943-201ENST00000401286 94 ntBASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 HMGA1P7-201ENST00000406908 502 ntBASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 FAM58DP-201ENST00000428076 619 ntBASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 KLF2P3-201ENST00000451977 1087 ntBASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 AL512356.2-201ENST00000546955 174 ntBASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 AC190387.1-201ENST00000551683 408 ntBASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 AL390955.2-201ENST00000603032 514 ntBASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSGALNACT1Q8TDX6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.43■□□□□ 0.38
CSGALNACT1Q8TDX6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.43■□□□□ 0.38
CSGALNACT1Q8TDX6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSGALNACT1Q8TDX6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CSGALNACT1Q8TDX6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms