Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 KRT8P49-201ENST00000604166 1432 ntBASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDH19Q8TAB3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 KRT18P67-201ENST00000432816 1264 ntBASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 AC018712.1-201ENST00000455767 687 ntBASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 AC073648.2-201ENST00000510116 352 ntBASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 AP001005.1-201ENST00000571755 1248 ntBASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 AL805961.1-202ENST00000641562 540 ntBASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 AL391256.1-201ENST00000443260 1855 ntBASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
PCDH19Q8TAB3 UBALD1-205ENST00000590891 2641 ntBASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 AC087163.2-201ENST00000457299 853 ntBASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 AF186996.4-201ENST00000467186 377 ntBASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 AC148477.8-201ENST00000624298 468 ntBASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH19Q8TAB3 PI4KAP1-204ENST00000612579 1703 ntBASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 AL590627.1-203ENST00000421194 1026 ntBASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 RNA5SP419-201ENST00000515908 135 ntBASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 AP002490.2-201ENST00000524791 560 ntBASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms