Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 AL136038.4-201ENST00000603606 1261 ntBASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 DBET-201ENST00000630918 3363 ntBASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 AC005052.1-201ENST00000625181 2492 ntBASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD2Q8NHY2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 AC144831.1-201ENST00000573312 2656 ntBASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 KRT18P48-201ENST00000434763 852 ntBASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 IGHV3-52-201ENST00000519770 353 ntBASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 AC140113.3-201ENST00000605663 199 ntBASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 LINC01023-201ENST00000606054 436 ntBASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 AL023973.1-201ENST00000624619 620 ntBASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RFWD2Q8NHY2 AC092384.3-202ENST00000564646 2873 ntBASIC16.83■□□□□ 0.29
RFWD2Q8NHY2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RFWD2Q8NHY2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RFWD2Q8NHY2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms