Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTL9Q8NET4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC20.79■□□□□ 0.92
RTL9Q8NET4 MIR661-201ENST00000384842 89 ntBASIC20.79■□□□□ 0.92
RTL9Q8NET4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTL9Q8NET4 AC093214.1-201ENST00000511688 1107 ntBASIC20.79■□□□□ 0.92
RTL9Q8NET4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.79■□□□□ 0.92
RTL9Q8NET4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.79■□□□□ 0.92
RTL9Q8NET4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.79■□□□□ 0.92
RTL9Q8NET4 AC021097.1-201ENST00000607902 574 ntBASIC20.79■□□□□ 0.92
RTL9Q8NET4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.79■□□□□ 0.92
RTL9Q8NET4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTL9Q8NET4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTL9Q8NET4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTL9Q8NET4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.79■□□□□ 0.92
RTL9Q8NET4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTL9Q8NET4 CROCCP2-202ENST00000412962 2773 ntBASIC20.79■□□□□ 0.92
RTL9Q8NET4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTL9Q8NET4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL9Q8NET4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTL9Q8NET4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL9Q8NET4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.78■□□□□ 0.92
RTL9Q8NET4 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.78■□□□□ 0.92
RTL9Q8NET4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.78■□□□□ 0.92
RTL9Q8NET4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL9Q8NET4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTL9Q8NET4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTL9Q8NET4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL9Q8NET4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL9Q8NET4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL9Q8NET4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTL9Q8NET4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.78■□□□□ 0.92
RTL9Q8NET4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RTL9Q8NET4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RTL9Q8NET4 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.78■□□□□ 0.92
RTL9Q8NET4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.78■□□□□ 0.92
RTL9Q8NET4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.78■□□□□ 0.92
RTL9Q8NET4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
RTL9Q8NET4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.78■□□□□ 0.92
RTL9Q8NET4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTL9Q8NET4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.78■□□□□ 0.92
RTL9Q8NET4 AC026150.2-201ENST00000564693 1156 ntBASIC20.78■□□□□ 0.92
RTL9Q8NET4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL9Q8NET4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.78■□□□□ 0.92
RTL9Q8NET4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL9Q8NET4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RTL9Q8NET4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL9Q8NET4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL9Q8NET4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTL9Q8NET4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTL9Q8NET4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTL9Q8NET4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTL9Q8NET4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTL9Q8NET4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.77■□□□□ 0.92
RTL9Q8NET4 TUBB8P12-201ENST00000308911 1335 ntBASIC20.77■□□□□ 0.92
RTL9Q8NET4 TUBB7P-202ENST00000428444 1305 ntBASIC20.77■□□□□ 0.92
RTL9Q8NET4 TUBB8P7-204ENST00000567960 1332 ntBASIC20.77■□□□□ 0.92
RTL9Q8NET4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.77■□□□□ 0.92
RTL9Q8NET4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.77■□□□□ 0.92
RTL9Q8NET4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.77■□□□□ 0.92
RTL9Q8NET4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RTL9Q8NET4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTL9Q8NET4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTL9Q8NET4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
RTL9Q8NET4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.77■□□□□ 0.92
RTL9Q8NET4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
RTL9Q8NET4 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.77■□□□□ 0.92
RTL9Q8NET4 IGHV3-62-201ENST00000520057 340 ntBASIC20.77■□□□□ 0.92
RTL9Q8NET4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.77■□□□□ 0.92
RTL9Q8NET4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
RTL9Q8NET4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTL9Q8NET4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.77■□□□□ 0.92
RTL9Q8NET4 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.77■□□□□ 0.92
RTL9Q8NET4 AC013467.2-201ENST00000605472 835 ntBASIC20.77■□□□□ 0.92
RTL9Q8NET4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
RTL9Q8NET4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTL9Q8NET4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTL9Q8NET4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTL9Q8NET4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.77■□□□□ 0.92
RTL9Q8NET4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.77■□□□□ 0.92
RTL9Q8NET4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTL9Q8NET4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
RTL9Q8NET4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
RTL9Q8NET4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RTL9Q8NET4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
RTL9Q8NET4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.76■□□□□ 0.91
RTL9Q8NET4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTL9Q8NET4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
RTL9Q8NET4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.76■□□□□ 0.91
RTL9Q8NET4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
RTL9Q8NET4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.76■□□□□ 0.91
RTL9Q8NET4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.76■□□□□ 0.91
RTL9Q8NET4 RBPMS2P1-201ENST00000437762 623 ntBASIC20.76■□□□□ 0.91
RTL9Q8NET4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.76■□□□□ 0.91
RTL9Q8NET4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.76■□□□□ 0.91
RTL9Q8NET4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.76■□□□□ 0.91
RTL9Q8NET4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.76■□□□□ 0.91
RTL9Q8NET4 AC027307.2-201ENST00000591252 911 ntBASIC20.76■□□□□ 0.91
RTL9Q8NET4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTL9Q8NET4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTL9Q8NET4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms