Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 GGTLC5P-201ENST00000617623 998 ntBASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 MIR1199-201ENST00000621445 119 ntBASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 TOP3BP1-201ENST00000420768 1380 ntBASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 AC073621.1-201ENST00000392730 636 ntBASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 AC079781.3-201ENST00000449110 356 ntBASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 AC087163.2-201ENST00000457299 853 ntBASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 RPS15P9-201ENST00000494093 319 ntBASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 AC105339.3-201ENST00000560043 636 ntBASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 PGM5P2-202ENST00000637225 1043 ntBASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 LINC00895-201ENST00000629028 1637 ntBASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 RNF216P1-203ENST00000404404 2427 ntBASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDRT4Q8N9R6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
CDRT4Q8N9R6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.77■□□□□ 0.12
CDRT4Q8N9R6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDRT4Q8N9R6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CDRT4Q8N9R6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDRT4Q8N9R6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDRT4Q8N9R6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.77■□□□□ 0.12
CDRT4Q8N9R6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDRT4Q8N9R6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
CDRT4Q8N9R6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
CDRT4Q8N9R6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.77■□□□□ 0.12
CDRT4Q8N9R6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDRT4Q8N9R6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CDRT4Q8N9R6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.77■□□□□ 0.12
CDRT4Q8N9R6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDRT4Q8N9R6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDRT4Q8N9R6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.77■□□□□ 0.12
CDRT4Q8N9R6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CDRT4Q8N9R6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDRT4Q8N9R6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms