Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.61■□□□□ 0.09
LSMEM1Q8N8F7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.61■□□□□ 0.09
LSMEM1Q8N8F7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LSMEM1Q8N8F7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
LSMEM1Q8N8F7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
LSMEM1Q8N8F7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 HCG4P8-203ENST00000443049 980 ntBASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 AL590787.1-201ENST00000568856 1315 ntBASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 NCF1C-201ENST00000438382 1427 ntBASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LSMEM1Q8N8F7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 UBALD1-205ENST00000590891 2641 ntBASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 TSPY19P-201ENST00000418461 509 ntBASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 TSPY18P-201ENST00000441642 509 ntBASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 KRT18P31-201ENST00000506277 1292 ntBASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 NKAPP1-205ENST00000585790 367 ntBASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 PCDHB17P-201ENST00000539533 2393 ntBASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.59■□□□□ 0.09
LSMEM1Q8N8F7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
LSMEM1Q8N8F7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LSMEM1Q8N8F7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.58■□□□□ 0.09
LSMEM1Q8N8F7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
LSMEM1Q8N8F7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LSMEM1Q8N8F7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LSMEM1Q8N8F7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.58■□□□□ 0.09
LSMEM1Q8N8F7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LSMEM1Q8N8F7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
LSMEM1Q8N8F7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms