Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 AC006557.2-201ENST00000592985 1240 ntBASIC17.52■□□□□ 0.4
PAF1Q8N7H5 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 AC148477.8-201ENST00000624298 468 ntBASIC17.52■□□□□ 0.4
PAF1Q8N7H5 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PAF1Q8N7H5 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.52■□□□□ 0.39
PAF1Q8N7H5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
PAF1Q8N7H5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PAF1Q8N7H5 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PAF1Q8N7H5 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
PAF1Q8N7H5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
PAF1Q8N7H5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PAF1Q8N7H5 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PAF1Q8N7H5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.52■□□□□ 0.39
PAF1Q8N7H5 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 LAGE3P1-201ENST00000425356 484 ntBASIC17.51■□□□□ 0.39
PAF1Q8N7H5 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 AC025062.2-201ENST00000605477 670 ntBASIC17.51■□□□□ 0.39
PAF1Q8N7H5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 AC073592.4-201ENST00000623827 446 ntBASIC17.51■□□□□ 0.39
PAF1Q8N7H5 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 AL365209.1-201ENST00000624418 6473 ntBASIC17.51■□□□□ 0.39
PAF1Q8N7H5 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PAF1Q8N7H5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 SLC25A6P4-201ENST00000586535 553 ntBASIC17.5■□□□□ 0.39
PAF1Q8N7H5 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 AL135999.2-201ENST00000622438 1686 ntBASIC17.5■□□□□ 0.39
PAF1Q8N7H5 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PAF1Q8N7H5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.49■□□□□ 0.39
PAF1Q8N7H5 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms