Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf42Q8N5U0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
C11orf42Q8N5U0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf42Q8N5U0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.21□□□□□ -0.13
C11orf42Q8N5U0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf42Q8N5U0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf42Q8N5U0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
C11orf42Q8N5U0 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
C11orf42Q8N5U0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf42Q8N5U0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.21□□□□□ -0.13
C11orf42Q8N5U0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf42Q8N5U0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.21□□□□□ -0.13
C11orf42Q8N5U0 LINC00982-205ENST00000420957 435 ntBASIC14.21□□□□□ -0.13
C11orf42Q8N5U0 AF186996.4-201ENST00000467186 377 ntBASIC14.21□□□□□ -0.13
C11orf42Q8N5U0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
C11orf42Q8N5U0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.21□□□□□ -0.13
C11orf42Q8N5U0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
C11orf42Q8N5U0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C11orf42Q8N5U0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.21□□□□□ -0.14
C11orf42Q8N5U0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
C11orf42Q8N5U0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
C11orf42Q8N5U0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
C11orf42Q8N5U0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
C11orf42Q8N5U0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.21□□□□□ -0.14
C11orf42Q8N5U0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
C11orf42Q8N5U0 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 HLA-A-201ENST00000376802 1334 ntBASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 AC026396.1-201ENST00000419388 421 ntBASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 AC004706.3-202ENST00000621574 984 ntBASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf42Q8N5U0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 AC108860.2-201ENST00000562760 2183 ntBASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 NCF1C-201ENST00000438382 1427 ntBASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 AL031284.1-201ENST00000419297 478 ntBASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 LAGE3P1-201ENST00000425356 484 ntBASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 KRT18P27-201ENST00000427733 1299 ntBASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 OR7E14P-202ENST00000530490 1290 ntBASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 AL662844.1-201ENST00000546340 181 ntBASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 AC012640.2-201ENST00000561606 901 ntBASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 AC139887.3-201ENST00000568585 713 ntBASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 AL049840.3-201ENST00000602669 611 ntBASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 AL353135.1-201ENST00000606729 504 ntBASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 AL773604.1-201ENST00000617417 272 ntBASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 FAM215A-202ENST00000632077 792 ntBASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf42Q8N5U0 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms