Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 AL671277.1-201ENST00000429656 993 ntBASIC18.9■□□□□ 0.62
TRIM50Q86XT4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 DUX4L17-201ENST00000557360 1267 ntBASIC18.9■□□□□ 0.62
TRIM50Q86XT4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 AC012569.1-201ENST00000591191 1524 ntBASIC18.9■□□□□ 0.62
TRIM50Q86XT4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.89■□□□□ 0.62
TRIM50Q86XT4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM50Q86XT4 PP12613-201ENST00000424958 2230 ntBASIC18.89■□□□□ 0.61
TRIM50Q86XT4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 AC023141.5-201ENST00000458585 616 ntBASIC18.89■□□□□ 0.61
TRIM50Q86XT4 AC109322.1-201ENST00000524499 1264 ntBASIC18.89■□□□□ 0.61
TRIM50Q86XT4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 AC026120.1-201ENST00000611536 926 ntBASIC18.89■□□□□ 0.61
TRIM50Q86XT4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 AC016396.2-201ENST00000562575 1417 ntBASIC18.89■□□□□ 0.61
TRIM50Q86XT4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM50Q86XT4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM50Q86XT4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms