Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 AL645608.8-201ENST00000606034 2086 ntBASIC16.3■□□□□ 0.2
RNF44Q7L0R7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.29■□□□□ 0.2
RNF44Q7L0R7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 POLD2P1-201ENST00000511220 997 ntBASIC16.29■□□□□ 0.2
RNF44Q7L0R7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 AC107918.2-201ENST00000530817 355 ntBASIC16.29■□□□□ 0.2
RNF44Q7L0R7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RNF44Q7L0R7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 PGAM5P1-201ENST00000518923 814 ntBASIC16.28■□□□□ 0.2
RNF44Q7L0R7 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 REXO1L3P-201ENST00000622202 1288 ntBASIC16.28■□□□□ 0.2
RNF44Q7L0R7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RNF44Q7L0R7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RNF44Q7L0R7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF44Q7L0R7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RNF44Q7L0R7 AC129492.6-201ENST00000611383 1305 ntBASIC16.27■□□□□ 0.2
RNF44Q7L0R7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF44Q7L0R7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
RNF44Q7L0R7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF44Q7L0R7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF44Q7L0R7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF44Q7L0R7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF44Q7L0R7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF44Q7L0R7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF44Q7L0R7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF44Q7L0R7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF44Q7L0R7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF44Q7L0R7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms