Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
LCA10Q71F78 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC9.23□□□□□ -0.93
LCA10Q71F78 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC9.23□□□□□ -0.93
LCA10Q71F78 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
LCA10Q71F78 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC9.23□□□□□ -0.93
LCA10Q71F78 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
LCA10Q71F78 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC9.23□□□□□ -0.93
LCA10Q71F78 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC9.23□□□□□ -0.93
LCA10Q71F78 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 AC009090.5-201ENST00000624886 2285 ntBASIC9.23□□□□□ -0.93
LCA10Q71F78 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC9.23□□□□□ -0.93
LCA10Q71F78 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC9.23□□□□□ -0.93
LCA10Q71F78 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC9.23□□□□□ -0.93
LCA10Q71F78 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 UNC93B5-201ENST00000530315 699 ntBASIC9.23□□□□□ -0.93
LCA10Q71F78 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC9.23□□□□□ -0.93
LCA10Q71F78 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC9.23□□□□□ -0.93
LCA10Q71F78 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC9.23□□□□□ -0.93
LCA10Q71F78 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
LCA10Q71F78 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
LCA10Q71F78 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
LCA10Q71F78 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC9.23□□□□□ -0.93
LCA10Q71F78 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC9.23□□□□□ -0.93
LCA10Q71F78 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC9.23□□□□□ -0.93
LCA10Q71F78 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC9.23□□□□□ -0.93
LCA10Q71F78 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC9.23□□□□□ -0.93
LCA10Q71F78 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC9.23□□□□□ -0.93
LCA10Q71F78 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
LCA10Q71F78 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC9.22□□□□□ -0.93
LCA10Q71F78 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
LCA10Q71F78 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC9.22□□□□□ -0.93
LCA10Q71F78 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC9.22□□□□□ -0.93
LCA10Q71F78 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC9.22□□□□□ -0.93
LCA10Q71F78 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC9.22□□□□□ -0.93
LCA10Q71F78 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
LCA10Q71F78 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 RER1-203ENST00000378513 3000 ntTSL 3 BASIC9.22□□□□□ -0.93
LCA10Q71F78 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
LCA10Q71F78 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC9.22□□□□□ -0.93
LCA10Q71F78 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC9.22□□□□□ -0.93
LCA10Q71F78 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC9.22□□□□□ -0.93
LCA10Q71F78 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC9.22□□□□□ -0.93
LCA10Q71F78 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
LCA10Q71F78 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC9.22□□□□□ -0.93
LCA10Q71F78 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC9.22□□□□□ -0.93
LCA10Q71F78 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC9.22□□□□□ -0.93
LCA10Q71F78 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
LCA10Q71F78 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 MIR935-201ENST00000401179 91 ntBASIC9.22□□□□□ -0.93
LCA10Q71F78 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC9.22□□□□□ -0.93
LCA10Q71F78 KRT17P3-201ENST00000420566 1262 ntBASIC9.22□□□□□ -0.93
LCA10Q71F78 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC9.22□□□□□ -0.93
LCA10Q71F78 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 Z85996.1-201ENST00000494644 937 ntBASIC9.22□□□□□ -0.93
LCA10Q71F78 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
LCA10Q71F78 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC9.22□□□□□ -0.93
LCA10Q71F78 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC9.22□□□□□ -0.93
LCA10Q71F78 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC9.22□□□□□ -0.93
LCA10Q71F78 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC9.22□□□□□ -0.93
LCA10Q71F78 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC9.22□□□□□ -0.93
LCA10Q71F78 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
LCA10Q71F78 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms