Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 PCDHB19P-201ENST00000570871 2371 ntBASIC17.39■□□□□ 0.37
CASC4Q6P4E1 AC092171.3-201ENST00000610122 2651 ntBASIC17.39■□□□□ 0.37
CASC4Q6P4E1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 AC078925.2-201ENST00000624013 1973 ntBASIC17.39■□□□□ 0.37
CASC4Q6P4E1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 FRMD8P1-201ENST00000440433 1524 ntBASIC17.38■□□□□ 0.37
CASC4Q6P4E1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 PMPCAP1-201ENST00000508114 1576 ntBASIC17.38■□□□□ 0.37
CASC4Q6P4E1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 IGHV3-47-201ENST00000425060 335 ntBASIC17.38■□□□□ 0.37
CASC4Q6P4E1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 SIGLEC30P-201ENST00000455569 941 ntBASIC17.38■□□□□ 0.37
CASC4Q6P4E1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 AL358472.4-201ENST00000633140 710 ntBASIC17.38■□□□□ 0.37
CASC4Q6P4E1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASC4Q6P4E1 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 AC148477.5-201ENST00000625164 1645 ntBASIC17.37■□□□□ 0.37
CASC4Q6P4E1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 AL020989.1-201ENST00000422979 469 ntBASIC17.37■□□□□ 0.37
CASC4Q6P4E1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 AC099336.1-202ENST00000602961 463 ntBASIC17.37■□□□□ 0.37
CASC4Q6P4E1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CASC4Q6P4E1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.36■□□□□ 0.37
CASC4Q6P4E1 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms