Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 AL021920.2-201ENST00000624828 1351 ntBASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 AC129492.6-201ENST00000611383 1305 ntBASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 VN2R19P-201ENST00000442399 1052 ntBASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 AC107918.2-201ENST00000530817 355 ntBASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 TOP3BP1-201ENST00000420768 1380 ntBASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP4R3AQ6IN85 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 TUBB8P12-201ENST00000308911 1335 ntBASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 TUBB7P-202ENST00000428444 1305 ntBASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 TUBB8P7-204ENST00000567960 1332 ntBASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 KRT8P49-201ENST00000604166 1432 ntBASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 ZNF259P1-201ENST00000407656 1365 ntBASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 AL121761.2-201ENST00000598007 1648 ntBASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.28■□□□□ 0.68
PPP4R3AQ6IN85 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.27■□□□□ 0.68
PPP4R3AQ6IN85 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PPP4R3AQ6IN85 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PPP4R3AQ6IN85 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PPP4R3AQ6IN85 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
PPP4R3AQ6IN85 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.27■□□□□ 0.68
PPP4R3AQ6IN85 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.27■□□□□ 0.68
PPP4R3AQ6IN85 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PPP4R3AQ6IN85 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PPP4R3AQ6IN85 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PPP4R3AQ6IN85 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PPP4R3AQ6IN85 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PPP4R3AQ6IN85 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.27■□□□□ 0.68
PPP4R3AQ6IN85 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PPP4R3AQ6IN85 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
PPP4R3AQ6IN85 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PPP4R3AQ6IN85 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms