Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF43Q68DV7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF43Q68DV7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF43Q68DV7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF43Q68DV7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF43Q68DV7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF43Q68DV7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF43Q68DV7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF43Q68DV7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF43Q68DV7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF43Q68DV7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF43Q68DV7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RNF43Q68DV7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF43Q68DV7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF43Q68DV7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF43Q68DV7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF43Q68DV7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF43Q68DV7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF43Q68DV7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.86■□□□□ 0.45
RNF43Q68DV7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RNF43Q68DV7 ELK2BP-201ENST00000415014 1224 ntBASIC17.86■□□□□ 0.45
RNF43Q68DV7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF43Q68DV7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF43Q68DV7 UNC93B6-202ENST00000528242 690 ntBASIC17.86■□□□□ 0.45
RNF43Q68DV7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF43Q68DV7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.86■□□□□ 0.45
RNF43Q68DV7 MIR3197-201ENST00000582241 73 ntBASIC17.86■□□□□ 0.45
RNF43Q68DV7 AL139327.4-201ENST00000612362 153 ntBASIC17.86■□□□□ 0.45
RNF43Q68DV7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.86■□□□□ 0.45
RNF43Q68DV7 PGM5P2-202ENST00000637225 1043 ntBASIC17.86■□□□□ 0.45
RNF43Q68DV7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF43Q68DV7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF43Q68DV7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF43Q68DV7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF43Q68DV7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.86■□□□□ 0.45
RNF43Q68DV7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF43Q68DV7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RNF43Q68DV7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF43Q68DV7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF43Q68DV7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RNF43Q68DV7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.86■□□□□ 0.45
RNF43Q68DV7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RNF43Q68DV7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
RNF43Q68DV7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.86■□□□□ 0.45
RNF43Q68DV7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF43Q68DV7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF43Q68DV7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF43Q68DV7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF43Q68DV7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF43Q68DV7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF43Q68DV7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF43Q68DV7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF43Q68DV7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF43Q68DV7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF43Q68DV7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF43Q68DV7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF43Q68DV7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF43Q68DV7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF43Q68DV7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF43Q68DV7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF43Q68DV7 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.85■□□□□ 0.45
RNF43Q68DV7 ACTG1P4-201ENST00000425123 1122 ntBASIC17.85■□□□□ 0.45
RNF43Q68DV7 AC009947.1-201ENST00000444350 727 ntBASIC17.85■□□□□ 0.45
RNF43Q68DV7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RNF43Q68DV7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF43Q68DV7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF43Q68DV7 AC002347.1-201ENST00000569543 541 ntBASIC17.85■□□□□ 0.45
RNF43Q68DV7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF43Q68DV7 AC006504.4-201ENST00000592118 1568 ntBASIC17.85■□□□□ 0.45
RNF43Q68DV7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF43Q68DV7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF43Q68DV7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF43Q68DV7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF43Q68DV7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF43Q68DV7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF43Q68DV7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF43Q68DV7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF43Q68DV7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RNF43Q68DV7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RNF43Q68DV7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF43Q68DV7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF43Q68DV7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RNF43Q68DV7 GPR89P-201ENST00000407924 1495 ntBASIC17.84■□□□□ 0.45
RNF43Q68DV7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF43Q68DV7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF43Q68DV7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF43Q68DV7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF43Q68DV7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF43Q68DV7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF43Q68DV7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF43Q68DV7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF43Q68DV7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF43Q68DV7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF43Q68DV7 AC004832.2-201ENST00000426397 482 ntBASIC17.84■□□□□ 0.45
RNF43Q68DV7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF43Q68DV7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.84■□□□□ 0.45
RNF43Q68DV7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF43Q68DV7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
RNF43Q68DV7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF43Q68DV7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms