Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.96■□□□□ 0.3
LDLRAP1Q5SW96 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
LDLRAP1Q5SW96 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.96■□□□□ 0.3
LDLRAP1Q5SW96 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
LDLRAP1Q5SW96 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 AC124947.2-201ENST00000547118 1133 ntBASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 AC022211.2-201ENST00000585075 2527 ntBASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 IL9RP2-201ENST00000423948 1312 ntBASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LDLRAP1Q5SW96 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 CROCCP1-201ENST00000426910 5675 ntBASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 PAWRP1-201ENST00000451083 565 ntBASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 AC011676.5-201ENST00000624864 2660 ntBASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
LDLRAP1Q5SW96 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 RNA5SP415-201ENST00000517246 115 ntBASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 UNC93B6-202ENST00000528242 690 ntBASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 AC120114.3-201ENST00000611923 658 ntBASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LDLRAP1Q5SW96 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms