Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IRX4P78413 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX4P78413 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX4P78413 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX4P78413 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.74■□□□□ 0.43
IRX4P78413 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IRX4P78413 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.74■□□□□ 0.43
IRX4P78413 AC002347.1-201ENST00000569543 541 ntBASIC17.74■□□□□ 0.43
IRX4P78413 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
IRX4P78413 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.74■□□□□ 0.43
IRX4P78413 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX4P78413 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX4P78413 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX4P78413 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX4P78413 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
IRX4P78413 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.74■□□□□ 0.43
IRX4P78413 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX4P78413 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX4P78413 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IRX4P78413 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
IRX4P78413 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
IRX4P78413 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX4P78413 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IRX4P78413 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX4P78413 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.73■□□□□ 0.43
IRX4P78413 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IRX4P78413 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
IRX4P78413 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
IRX4P78413 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IRX4P78413 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
IRX4P78413 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IRX4P78413 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
IRX4P78413 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IRX4P78413 AC009949.1-201ENST00000623048 1830 ntBASIC17.73■□□□□ 0.43
IRX4P78413 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.73■□□□□ 0.43
IRX4P78413 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IRX4P78413 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
IRX4P78413 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IRX4P78413 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
IRX4P78413 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IRX4P78413 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.73■□□□□ 0.43
IRX4P78413 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.73■□□□□ 0.43
IRX4P78413 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.73■□□□□ 0.43
IRX4P78413 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.73■□□□□ 0.43
IRX4P78413 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.73■□□□□ 0.43
IRX4P78413 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
IRX4P78413 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IRX4P78413 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
IRX4P78413 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
IRX4P78413 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IRX4P78413 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IRX4P78413 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IRX4P78413 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IRX4P78413 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
IRX4P78413 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.72■□□□□ 0.43
IRX4P78413 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.72■□□□□ 0.43
IRX4P78413 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.72■□□□□ 0.43
IRX4P78413 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.72■□□□□ 0.43
IRX4P78413 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.72■□□□□ 0.43
IRX4P78413 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
IRX4P78413 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.72■□□□□ 0.43
IRX4P78413 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX4P78413 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX4P78413 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX4P78413 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX4P78413 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX4P78413 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.72■□□□□ 0.43
IRX4P78413 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.72■□□□□ 0.43
IRX4P78413 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX4P78413 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX4P78413 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX4P78413 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX4P78413 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX4P78413 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX4P78413 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.72■□□□□ 0.43
IRX4P78413 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX4P78413 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX4P78413 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IRX4P78413 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.72■□□□□ 0.43
IRX4P78413 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.72■□□□□ 0.43
IRX4P78413 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.72■□□□□ 0.43
IRX4P78413 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.72■□□□□ 0.43
IRX4P78413 MTDHP5-201ENST00000598980 586 ntBASIC17.72■□□□□ 0.43
IRX4P78413 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.72■□□□□ 0.43
IRX4P78413 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX4P78413 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
IRX4P78413 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
IRX4P78413 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
IRX4P78413 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
IRX4P78413 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
IRX4P78413 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
IRX4P78413 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX4P78413 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX4P78413 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.72■□□□□ 0.43
IRX4P78413 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX4P78413 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX4P78413 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
IRX4P78413 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
IRX4P78413 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX4P78413 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms