Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GABREP78334 AL009183.1-201ENST00000603760 355 ntBASIC16.13■□□□□ 0.17
GABREP78334 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.13■□□□□ 0.17
GABREP78334 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GABREP78334 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GABREP78334 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GABREP78334 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GABREP78334 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
GABREP78334 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GABREP78334 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GABREP78334 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
GABREP78334 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.13■□□□□ 0.17
GABREP78334 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.13■□□□□ 0.17
GABREP78334 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GABREP78334 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.13■□□□□ 0.17
GABREP78334 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.12■□□□□ 0.17
GABREP78334 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GABREP78334 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GABREP78334 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.12■□□□□ 0.17
GABREP78334 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GABREP78334 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GABREP78334 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GABREP78334 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.12■□□□□ 0.17
GABREP78334 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GABREP78334 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GABREP78334 AL133373.2-201ENST00000623187 2828 ntBASIC16.12■□□□□ 0.17
GABREP78334 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GABREP78334 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.12■□□□□ 0.17
GABREP78334 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GABREP78334 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
GABREP78334 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GABREP78334 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
GABREP78334 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.12■□□□□ 0.17
GABREP78334 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.12■□□□□ 0.17
GABREP78334 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.12■□□□□ 0.17
GABREP78334 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
GABREP78334 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.12■□□□□ 0.17
GABREP78334 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.12■□□□□ 0.17
GABREP78334 LINC01225-203ENST00000563550 1244 ntBASIC16.12■□□□□ 0.17
GABREP78334 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GABREP78334 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.12■□□□□ 0.17
GABREP78334 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GABREP78334 AC012569.1-201ENST00000591191 1524 ntBASIC16.12■□□□□ 0.17
GABREP78334 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.12■□□□□ 0.17
GABREP78334 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.12■□□□□ 0.17
GABREP78334 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GABREP78334 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
GABREP78334 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GABREP78334 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
GABREP78334 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GABREP78334 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GABREP78334 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GABREP78334 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
GABREP78334 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GABREP78334 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GABREP78334 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GABREP78334 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GABREP78334 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
GABREP78334 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
GABREP78334 PKD1P1-201ENST00000458669 6805 ntBASIC16.11■□□□□ 0.17
GABREP78334 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.11■□□□□ 0.17
GABREP78334 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.11■□□□□ 0.17
GABREP78334 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
GABREP78334 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
GABREP78334 AC138028.4-201ENST00000564984 1845 ntBASIC16.11■□□□□ 0.17
GABREP78334 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.11■□□□□ 0.17
GABREP78334 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GABREP78334 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.11■□□□□ 0.17
GABREP78334 AC097493.3-201ENST00000509725 367 ntBASIC16.11■□□□□ 0.17
GABREP78334 AP005018.1-201ENST00000525475 301 ntBASIC16.11■□□□□ 0.17
GABREP78334 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.11■□□□□ 0.17
GABREP78334 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.11■□□□□ 0.17
GABREP78334 AC027307.3-201ENST00000594262 1100 ntBASIC16.11■□□□□ 0.17
GABREP78334 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.11■□□□□ 0.17
GABREP78334 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.11■□□□□ 0.17
GABREP78334 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GABREP78334 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
GABREP78334 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
GABREP78334 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GABREP78334 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
GABREP78334 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GABREP78334 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.11■□□□□ 0.17
GABREP78334 REXO1L11P-201ENST00000620964 1927 ntBASIC16.11■□□□□ 0.17
GABREP78334 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
GABREP78334 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.11■□□□□ 0.17
GABREP78334 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.11■□□□□ 0.17
GABREP78334 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.11■□□□□ 0.17
GABREP78334 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.11■□□□□ 0.17
GABREP78334 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GABREP78334 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GABREP78334 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
GABREP78334 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GABREP78334 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
GABREP78334 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
GABREP78334 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
GABREP78334 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
GABREP78334 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.1■□□□□ 0.17
GABREP78334 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
GABREP78334 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
GABREP78334 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms