Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LMO4P61968 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
LMO4P61968 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
LMO4P61968 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO4P61968 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO4P61968 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO4P61968 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.87□□□□□ -0.19
LMO4P61968 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO4P61968 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LMO4P61968 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO4P61968 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LMO4P61968 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO4P61968 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO4P61968 MIR346-201ENST00000362234 95 ntBASIC13.87□□□□□ -0.19
LMO4P61968 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.87□□□□□ -0.19
LMO4P61968 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.87□□□□□ -0.19
LMO4P61968 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.87□□□□□ -0.19
LMO4P61968 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LMO4P61968 FAM8A3P-201ENST00000427218 844 ntBASIC13.87□□□□□ -0.19
LMO4P61968 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.87□□□□□ -0.19
LMO4P61968 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.87□□□□□ -0.19
LMO4P61968 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
LMO4P61968 CNN2P2-201ENST00000443536 909 ntBASIC13.87□□□□□ -0.19
LMO4P61968 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.87□□□□□ -0.19
LMO4P61968 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
LMO4P61968 CNN2P3-201ENST00000450201 906 ntBASIC13.87□□□□□ -0.19
LMO4P61968 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.87□□□□□ -0.19
LMO4P61968 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO4P61968 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
LMO4P61968 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LMO4P61968 AC005498.2-205ENST00000593218 784 ntBASIC13.87□□□□□ -0.19
LMO4P61968 AC092364.2-202ENST00000597012 1073 ntBASIC13.87□□□□□ -0.19
LMO4P61968 AC021097.1-201ENST00000607902 574 ntBASIC13.87□□□□□ -0.19
LMO4P61968 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.87□□□□□ -0.19
LMO4P61968 AL136317.3-201ENST00000618497 906 ntBASIC13.87□□□□□ -0.19
LMO4P61968 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.87□□□□□ -0.19
LMO4P61968 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.87□□□□□ -0.19
LMO4P61968 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO4P61968 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LMO4P61968 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LMO4P61968 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO4P61968 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO4P61968 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO4P61968 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LMO4P61968 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LMO4P61968 TUBB8P12-201ENST00000308911 1335 ntBASIC13.87□□□□□ -0.19
LMO4P61968 TUBB7P-202ENST00000428444 1305 ntBASIC13.87□□□□□ -0.19
LMO4P61968 TUBB8P7-204ENST00000567960 1332 ntBASIC13.87□□□□□ -0.19
LMO4P61968 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LMO4P61968 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LMO4P61968 AL133373.2-201ENST00000623187 2828 ntBASIC13.86□□□□□ -0.19
LMO4P61968 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.86□□□□□ -0.19
LMO4P61968 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LMO4P61968 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.86□□□□□ -0.19
LMO4P61968 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO4P61968 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO4P61968 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO4P61968 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO4P61968 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO4P61968 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO4P61968 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO4P61968 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.86□□□□□ -0.19
LMO4P61968 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO4P61968 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
LMO4P61968 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LMO4P61968 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
LMO4P61968 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LMO4P61968 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
LMO4P61968 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.86□□□□□ -0.19
LMO4P61968 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.86□□□□□ -0.19
LMO4P61968 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.86□□□□□ -0.19
LMO4P61968 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO4P61968 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.86□□□□□ -0.19
LMO4P61968 SLC25A39P2-201ENST00000537614 270 ntBASIC13.86□□□□□ -0.19
LMO4P61968 DUX4L27-201ENST00000554796 1261 ntBASIC13.86□□□□□ -0.19
LMO4P61968 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.86□□□□□ -0.19
LMO4P61968 AC051619.7-201ENST00000568314 623 ntBASIC13.86□□□□□ -0.19
LMO4P61968 AP000842.3-202ENST00000569238 1080 ntBASIC13.86□□□□□ -0.19
LMO4P61968 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO4P61968 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.86□□□□□ -0.19
LMO4P61968 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.86□□□□□ -0.19
LMO4P61968 AL096865.1-201ENST00000606796 927 ntBASIC13.86□□□□□ -0.19
LMO4P61968 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.86□□□□□ -0.19
LMO4P61968 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LMO4P61968 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LMO4P61968 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO4P61968 TUBB3P1-201ENST00000405796 1332 ntBASIC13.86□□□□□ -0.19
LMO4P61968 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.86□□□□□ -0.19
LMO4P61968 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.86□□□□□ -0.19
LMO4P61968 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO4P61968 AC092053.1-201ENST00000605787 1936 ntBASIC13.86□□□□□ -0.19
LMO4P61968 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.86□□□□□ -0.19
LMO4P61968 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LMO4P61968 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LMO4P61968 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LMO4P61968 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LMO4P61968 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LMO4P61968 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LMO4P61968 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LMO4P61968 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms