Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AL353732.1-201ENST00000569618 1459 ntBASIC15.96■□□□□ 0.14
RAB38P57729 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAB38P57729 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAB38P57729 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RAB38P57729 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.96■□□□□ 0.14
RAB38P57729 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAB38P57729 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB38P57729 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB38P57729 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB38P57729 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB38P57729 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB38P57729 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RAB38P57729 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB38P57729 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB38P57729 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB38P57729 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB38P57729 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB38P57729 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB38P57729 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB38P57729 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB38P57729 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB38P57729 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB38P57729 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB38P57729 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB38P57729 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB38P57729 OR6D1P-203ENST00000641209 4860 ntBASIC15.95■□□□□ 0.14
RAB38P57729 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB38P57729 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB38P57729 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB38P57729 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB38P57729 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB38P57729 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB38P57729 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RAB38P57729 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RAB38P57729 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB38P57729 AC096734.2-201ENST00000562054 433 ntBASIC15.95■□□□□ 0.14
RAB38P57729 ACTL9-202ENST00000612068 1252 ntBASIC15.95■□□□□ 0.14
RAB38P57729 FAM197Y3-203ENST00000618346 717 ntBASIC15.95■□□□□ 0.14
RAB38P57729 AC010507.1-201ENST00000633895 436 ntBASIC15.95■□□□□ 0.14
RAB38P57729 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB38P57729 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RAB38P57729 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB38P57729 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB38P57729 AC080080.1-201ENST00000625121 2420 ntBASIC15.95■□□□□ 0.14
RAB38P57729 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB38P57729 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RAB38P57729 AC020916.1-201ENST00000587762 1774 ntBASIC15.95■□□□□ 0.14
RAB38P57729 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RAB38P57729 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB38P57729 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB38P57729 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB38P57729 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB38P57729 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB38P57729 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.94■□□□□ 0.14
RAB38P57729 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB38P57729 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
RAB38P57729 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB38P57729 AC005915.1-201ENST00000624912 2018 ntBASIC15.94■□□□□ 0.14
RAB38P57729 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB38P57729 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB38P57729 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB38P57729 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB38P57729 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB38P57729 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB38P57729 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB38P57729 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB38P57729 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.94■□□□□ 0.14
RAB38P57729 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.94■□□□□ 0.14
RAB38P57729 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.94■□□□□ 0.14
RAB38P57729 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.94■□□□□ 0.14
RAB38P57729 KRT18P3-201ENST00000451602 1288 ntBASIC15.94■□□□□ 0.14
RAB38P57729 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.94■□□□□ 0.14
RAB38P57729 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RAB38P57729 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.94■□□□□ 0.14
RAB38P57729 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.94■□□□□ 0.14
RAB38P57729 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.94■□□□□ 0.14
RAB38P57729 RNA5SP416-201ENST00000516838 111 ntBASIC15.94■□□□□ 0.14
RAB38P57729 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB38P57729 KRT18P58-201ENST00000527480 1120 ntBASIC15.94■□□□□ 0.14
RAB38P57729 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.94■□□□□ 0.14
RAB38P57729 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.94■□□□□ 0.14
RAB38P57729 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB38P57729 MPDU1-223ENST00000582151 728 ntBASIC15.94■□□□□ 0.14
RAB38P57729 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB38P57729 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.94■□□□□ 0.14
RAB38P57729 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB38P57729 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
RAB38P57729 PCDHB17P-201ENST00000539533 2393 ntBASIC15.94■□□□□ 0.14
RAB38P57729 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB38P57729 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.94■□□□□ 0.14
RAB38P57729 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB38P57729 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
RAB38P57729 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RAB38P57729 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.94■□□□□ 0.14
RAB38P57729 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB38P57729 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.93■□□□□ 0.14
RAB38P57729 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
RAB38P57729 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB38P57729 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB38P57729 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms