Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.89■□□□□ 0.13
CDH12P55289 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.89■□□□□ 0.13
CDH12P55289 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH12P55289 AC009533.2-201ENST00000543664 586 ntBASIC15.89■□□□□ 0.13
CDH12P55289 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.89■□□□□ 0.13
CDH12P55289 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.89■□□□□ 0.13
CDH12P55289 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.89■□□□□ 0.13
CDH12P55289 AC116407.4-201ENST00000623319 1061 ntBASIC15.89■□□□□ 0.13
CDH12P55289 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.89■□□□□ 0.13
CDH12P55289 AL391005.1-201ENST00000623953 2435 ntBASIC15.89■□□□□ 0.13
CDH12P55289 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH12P55289 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH12P55289 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH12P55289 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH12P55289 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH12P55289 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH12P55289 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CDH12P55289 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH12P55289 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH12P55289 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.89■□□□□ 0.13
CDH12P55289 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CDH12P55289 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH12P55289 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH12P55289 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH12P55289 PCDHB17P-201ENST00000539533 2393 ntBASIC15.89■□□□□ 0.13
CDH12P55289 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH12P55289 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH12P55289 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH12P55289 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDH12P55289 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH12P55289 AL162727.3-201ENST00000635661 2787 ntBASIC15.88■□□□□ 0.13
CDH12P55289 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH12P55289 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH12P55289 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH12P55289 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDH12P55289 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH12P55289 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH12P55289 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
CDH12P55289 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH12P55289 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH12P55289 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH12P55289 STK25P1-201ENST00000585406 838 ntBASIC15.88■□□□□ 0.13
CDH12P55289 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH12P55289 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDH12P55289 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH12P55289 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH12P55289 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH12P55289 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH12P55289 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH12P55289 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
CDH12P55289 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH12P55289 KRT18P1-202ENST00000452408 1331 ntBASIC15.88■□□□□ 0.13
CDH12P55289 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH12P55289 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH12P55289 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH12P55289 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.88■□□□□ 0.13
CDH12P55289 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CDH12P55289 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH12P55289 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH12P55289 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH12P55289 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH12P55289 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH12P55289 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CDH12P55289 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH12P55289 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH12P55289 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH12P55289 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH12P55289 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH12P55289 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH12P55289 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
CDH12P55289 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH12P55289 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH12P55289 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH12P55289 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH12P55289 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH12P55289 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH12P55289 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH12P55289 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CDH12P55289 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH12P55289 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH12P55289 PCDHA1-201ENST00000378133 2726 ntBASIC15.87■□□□□ 0.13
CDH12P55289 AL353593.2-201ENST00000602529 1483 ntBASIC15.87■□□□□ 0.13
CDH12P55289 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH12P55289 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CDH12P55289 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
CDH12P55289 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH12P55289 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH12P55289 PCED1CP-201ENST00000419887 785 ntBASIC15.87■□□□□ 0.13
CDH12P55289 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.87■□□□□ 0.13
CDH12P55289 FAM210CP-201ENST00000445714 574 ntBASIC15.87■□□□□ 0.13
CDH12P55289 TSSC2-201ENST00000450217 709 ntBASIC15.87■□□□□ 0.13
CDH12P55289 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.87■□□□□ 0.13
CDH12P55289 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH12P55289 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CDH12P55289 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH12P55289 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH12P55289 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH12P55289 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH12P55289 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH12P55289 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms