Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACLYP53396 BICD1-207ENST00000551848 1962 ntBASIC18.56■□□□□ 0.56
ACLYP53396 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
ACLYP53396 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACLYP53396 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ACLYP53396 HLA-H-201ENST00000383620 1096 ntBASIC18.56■□□□□ 0.56
ACLYP53396 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
ACLYP53396 ATP5G2P4-201ENST00000442175 420 ntBASIC18.56■□□□□ 0.56
ACLYP53396 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.56■□□□□ 0.56
ACLYP53396 MIR4492-201ENST00000581627 80 ntBASIC18.56■□□□□ 0.56
ACLYP53396 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.56■□□□□ 0.56
ACLYP53396 AC008738.7-201ENST00000609744 511 ntBASIC18.56■□□□□ 0.56
ACLYP53396 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.56■□□□□ 0.56
ACLYP53396 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.56■□□□□ 0.56
ACLYP53396 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.56■□□□□ 0.56
ACLYP53396 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACLYP53396 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.56■□□□□ 0.56
ACLYP53396 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ACLYP53396 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACLYP53396 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACLYP53396 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACLYP53396 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.56■□□□□ 0.56
ACLYP53396 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACLYP53396 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
ACLYP53396 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.55■□□□□ 0.56
ACLYP53396 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ACLYP53396 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ACLYP53396 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.55■□□□□ 0.56
ACLYP53396 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.55■□□□□ 0.56
ACLYP53396 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.55■□□□□ 0.56
ACLYP53396 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ACLYP53396 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
ACLYP53396 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ACLYP53396 AC087499.5-201ENST00000452760 1342 ntBASIC18.55■□□□□ 0.56
ACLYP53396 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.55■□□□□ 0.56
ACLYP53396 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ACLYP53396 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ACLYP53396 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ACLYP53396 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ACLYP53396 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.55■□□□□ 0.56
ACLYP53396 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ACLYP53396 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.55■□□□□ 0.56
ACLYP53396 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ACLYP53396 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ACLYP53396 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ACLYP53396 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.55■□□□□ 0.56
ACLYP53396 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.55■□□□□ 0.56
ACLYP53396 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ACLYP53396 TEX28P1-201ENST00000613479 1221 ntBASIC18.55■□□□□ 0.56
ACLYP53396 TEX28P2-201ENST00000617764 1221 ntBASIC18.55■□□□□ 0.56
ACLYP53396 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.55■□□□□ 0.56
ACLYP53396 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ACLYP53396 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ACLYP53396 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ACLYP53396 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ACLYP53396 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ACLYP53396 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
ACLYP53396 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ACLYP53396 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ACLYP53396 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ACLYP53396 AL021920.2-201ENST00000624828 1351 ntBASIC18.55■□□□□ 0.56
ACLYP53396 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ACLYP53396 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ACLYP53396 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ACLYP53396 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ACLYP53396 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ACLYP53396 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ACLYP53396 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ACLYP53396 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.54■□□□□ 0.56
ACLYP53396 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.54■□□□□ 0.56
ACLYP53396 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ACLYP53396 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ACLYP53396 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ACLYP53396 AC007541.1-201ENST00000570282 1469 ntBASIC18.54■□□□□ 0.56
ACLYP53396 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ACLYP53396 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ACLYP53396 SLC25A1P3-201ENST00000395415 828 ntBASIC18.54■□□□□ 0.56
ACLYP53396 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ACLYP53396 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.54■□□□□ 0.56
ACLYP53396 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ACLYP53396 ARSEP1-201ENST00000420443 635 ntBASIC18.54■□□□□ 0.56
ACLYP53396 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
ACLYP53396 AL353705.2-201ENST00000428243 662 ntBASIC18.54■□□□□ 0.56
ACLYP53396 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.54■□□□□ 0.56
ACLYP53396 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ACLYP53396 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.54■□□□□ 0.56
ACLYP53396 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.54■□□□□ 0.56
ACLYP53396 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ACLYP53396 PRYP6-201ENST00000514804 343 ntBASIC18.54■□□□□ 0.56
ACLYP53396 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ACLYP53396 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.54■□□□□ 0.56
ACLYP53396 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ACLYP53396 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.54■□□□□ 0.56
ACLYP53396 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.54■□□□□ 0.56
ACLYP53396 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.54■□□□□ 0.56
ACLYP53396 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.54■□□□□ 0.56
ACLYP53396 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ACLYP53396 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ACLYP53396 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ACLYP53396 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms