Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
HMGA2P52926 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HMGA2P52926 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGA2P52926 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HMGA2P52926 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMGA2P52926 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMGA2P52926 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
HMGA2P52926 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMGA2P52926 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.52■□□□□ 0.07
HMGA2P52926 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
HMGA2P52926 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
HMGA2P52926 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.52■□□□□ 0.07
HMGA2P52926 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMGA2P52926 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMGA2P52926 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.52■□□□□ 0.07
HMGA2P52926 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.51■□□□□ 0.07
HMGA2P52926 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.51■□□□□ 0.07
HMGA2P52926 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 AC097637.2-201ENST00000624096 1997 ntBASIC15.51■□□□□ 0.07
HMGA2P52926 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HMGA2P52926 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGA2P52926 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.51■□□□□ 0.07
HMGA2P52926 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.51■□□□□ 0.07
HMGA2P52926 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
HMGA2P52926 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.51■□□□□ 0.07
HMGA2P52926 CHCHD2P8-201ENST00000429873 447 ntBASIC15.51■□□□□ 0.07
HMGA2P52926 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.51■□□□□ 0.07
HMGA2P52926 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.51■□□□□ 0.07
HMGA2P52926 NTF6B-201ENST00000591913 560 ntBASIC15.51■□□□□ 0.07
HMGA2P52926 TERC-201ENST00000602385 541 ntBASIC15.51■□□□□ 0.07
HMGA2P52926 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.51■□□□□ 0.07
HMGA2P52926 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGA2P52926 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
HMGA2P52926 AL596087.1-201ENST00000400979 1969 ntBASIC15.51■□□□□ 0.07
HMGA2P52926 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
HMGA2P52926 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.51■□□□□ 0.07
HMGA2P52926 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HMGA2P52926 AC005052.1-201ENST00000625181 2492 ntBASIC15.51■□□□□ 0.07
HMGA2P52926 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
HMGA2P52926 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMGA2P52926 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HMGA2P52926 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGA2P52926 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGA2P52926 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGA2P52926 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
HMGA2P52926 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGA2P52926 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGA2P52926 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGA2P52926 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HMGA2P52926 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
HMGA2P52926 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGA2P52926 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGA2P52926 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
HMGA2P52926 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HMGA2P52926 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
HMGA2P52926 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGA2P52926 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGA2P52926 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGA2P52926 LINC00982-205ENST00000420957 435 ntBASIC15.5■□□□□ 0.07
HMGA2P52926 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGA2P52926 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.5■□□□□ 0.07
HMGA2P52926 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.5■□□□□ 0.07
HMGA2P52926 AL121672.3-201ENST00000608644 468 ntBASIC15.5■□□□□ 0.07
HMGA2P52926 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.5■□□□□ 0.07
HMGA2P52926 AC073592.4-201ENST00000623827 446 ntBASIC15.5■□□□□ 0.07
HMGA2P52926 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
HMGA2P52926 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.5■□□□□ 0.07
HMGA2P52926 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.5■□□□□ 0.07
HMGA2P52926 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
HMGA2P52926 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGA2P52926 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGA2P52926 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGA2P52926 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGA2P52926 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.5■□□□□ 0.07
HMGA2P52926 GGT3P-204ENST00000453783 1664 ntBASIC15.5■□□□□ 0.07
HMGA2P52926 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.5■□□□□ 0.07
HMGA2P52926 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms