Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
KNTC1P50748 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KNTC1P50748 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
KNTC1P50748 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
KNTC1P50748 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KNTC1P50748 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
KNTC1P50748 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KNTC1P50748 KRT18P55-202ENST00000578578 1546 ntBASIC16.07■□□□□ 0.16
KNTC1P50748 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.07■□□□□ 0.16
KNTC1P50748 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
KNTC1P50748 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KNTC1P50748 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.07■□□□□ 0.16
KNTC1P50748 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.07■□□□□ 0.16
KNTC1P50748 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KNTC1P50748 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.07■□□□□ 0.16
KNTC1P50748 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KNTC1P50748 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KNTC1P50748 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
KNTC1P50748 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
KNTC1P50748 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KNTC1P50748 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KNTC1P50748 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KNTC1P50748 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.07■□□□□ 0.16
KNTC1P50748 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KNTC1P50748 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KNTC1P50748 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
KNTC1P50748 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
KNTC1P50748 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
KNTC1P50748 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KNTC1P50748 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.06■□□□□ 0.16
KNTC1P50748 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KNTC1P50748 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
KNTC1P50748 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KNTC1P50748 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KNTC1P50748 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.06■□□□□ 0.16
KNTC1P50748 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.06■□□□□ 0.16
KNTC1P50748 AC027369.6-201ENST00000525520 931 ntBASIC16.06■□□□□ 0.16
KNTC1P50748 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
KNTC1P50748 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KNTC1P50748 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KNTC1P50748 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.06■□□□□ 0.16
KNTC1P50748 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.06■□□□□ 0.16
KNTC1P50748 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
KNTC1P50748 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KNTC1P50748 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KNTC1P50748 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KNTC1P50748 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.06■□□□□ 0.16
KNTC1P50748 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.06■□□□□ 0.16
KNTC1P50748 AL391825.1-201ENST00000457671 1364 ntBASIC16.06■□□□□ 0.16
KNTC1P50748 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KNTC1P50748 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
KNTC1P50748 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KNTC1P50748 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KNTC1P50748 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KNTC1P50748 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KNTC1P50748 HCG4-201ENST00000418983 998 ntBASIC16.06■□□□□ 0.16
KNTC1P50748 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.06■□□□□ 0.16
KNTC1P50748 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
KNTC1P50748 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.06■□□□□ 0.16
KNTC1P50748 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.06■□□□□ 0.16
KNTC1P50748 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.06■□□□□ 0.16
KNTC1P50748 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.06■□□□□ 0.16
KNTC1P50748 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KNTC1P50748 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KNTC1P50748 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KNTC1P50748 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.05■□□□□ 0.16
KNTC1P50748 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KNTC1P50748 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.05■□□□□ 0.16
KNTC1P50748 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KNTC1P50748 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
KNTC1P50748 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KNTC1P50748 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KNTC1P50748 AC131009.4-201ENST00000624048 1740 ntBASIC16.05■□□□□ 0.16
KNTC1P50748 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.05■□□□□ 0.16
KNTC1P50748 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KNTC1P50748 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KNTC1P50748 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KNTC1P50748 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.05■□□□□ 0.16
KNTC1P50748 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KNTC1P50748 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
KNTC1P50748 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
KNTC1P50748 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.05■□□□□ 0.16
KNTC1P50748 U91328.1-201ENST00000437528 223 ntBASIC16.05■□□□□ 0.16
KNTC1P50748 ATP5G2P4-201ENST00000442175 420 ntBASIC16.05■□□□□ 0.16
KNTC1P50748 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.05■□□□□ 0.16
KNTC1P50748 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.05■□□□□ 0.16
KNTC1P50748 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.05■□□□□ 0.16
KNTC1P50748 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KNTC1P50748 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.05■□□□□ 0.16
KNTC1P50748 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KNTC1P50748 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.05■□□□□ 0.16
KNTC1P50748 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.05■□□□□ 0.16
KNTC1P50748 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KNTC1P50748 AL353732.1-201ENST00000569618 1459 ntBASIC16.05■□□□□ 0.16
KNTC1P50748 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
KNTC1P50748 AC098818.2-201ENST00000564925 2320 ntBASIC16.05■□□□□ 0.16
KNTC1P50748 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.05■□□□□ 0.16
KNTC1P50748 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
KNTC1P50748 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.05■□□□□ 0.16
KNTC1P50748 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms