Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK7P50613 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK7P50613 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
CDK7P50613 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CDK7P50613 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK7P50613 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.7■□□□□ 0.58
CDK7P50613 NME2P1-201ENST00000426182 414 ntBASIC18.7■□□□□ 0.58
CDK7P50613 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CDK7P50613 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.7■□□□□ 0.58
CDK7P50613 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.7■□□□□ 0.58
CDK7P50613 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.7■□□□□ 0.58
CDK7P50613 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.7■□□□□ 0.58
CDK7P50613 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.7■□□□□ 0.58
CDK7P50613 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.7■□□□□ 0.58
CDK7P50613 AL662799.1-202ENST00000614205 422 ntBASIC18.7■□□□□ 0.58
CDK7P50613 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.7■□□□□ 0.58
CDK7P50613 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK7P50613 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK7P50613 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDK7P50613 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK7P50613 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK7P50613 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK7P50613 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CDK7P50613 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CDK7P50613 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK7P50613 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.69■□□□□ 0.58
CDK7P50613 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK7P50613 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK7P50613 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDK7P50613 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.69■□□□□ 0.58
CDK7P50613 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.69■□□□□ 0.58
CDK7P50613 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CDK7P50613 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CDK7P50613 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.69■□□□□ 0.58
CDK7P50613 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CDK7P50613 PIN1P1-201ENST00000412108 996 ntBASIC18.69■□□□□ 0.58
CDK7P50613 HCG4-201ENST00000418983 998 ntBASIC18.69■□□□□ 0.58
CDK7P50613 TSSK5P-201ENST00000423978 907 ntBASIC18.69■□□□□ 0.58
CDK7P50613 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
CDK7P50613 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
CDK7P50613 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDK7P50613 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CDK7P50613 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK7P50613 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CDK7P50613 AL596325.1-201ENST00000563991 1082 ntBASIC18.69■□□□□ 0.58
CDK7P50613 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CDK7P50613 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.69■□□□□ 0.58
CDK7P50613 AC027307.3-201ENST00000594262 1100 ntBASIC18.69■□□□□ 0.58
CDK7P50613 AL590560.3-201ENST00000623350 461 ntBASIC18.69■□□□□ 0.58
CDK7P50613 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.69■□□□□ 0.58
CDK7P50613 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDK7P50613 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.69■□□□□ 0.58
CDK7P50613 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.69■□□□□ 0.58
CDK7P50613 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CDK7P50613 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CDK7P50613 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK7P50613 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK7P50613 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK7P50613 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CDK7P50613 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK7P50613 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK7P50613 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.68■□□□□ 0.58
CDK7P50613 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK7P50613 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.68■□□□□ 0.58
CDK7P50613 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK7P50613 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CDK7P50613 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK7P50613 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK7P50613 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CDK7P50613 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK7P50613 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.68■□□□□ 0.58
CDK7P50613 RNU1-129P-201ENST00000384064 167 ntBASIC18.68■□□□□ 0.58
CDK7P50613 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK7P50613 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.68■□□□□ 0.58
CDK7P50613 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.68■□□□□ 0.58
CDK7P50613 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.68■□□□□ 0.58
CDK7P50613 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK7P50613 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.68■□□□□ 0.58
CDK7P50613 MIR3909-201ENST00000579518 119 ntBASIC18.68■□□□□ 0.58
CDK7P50613 U1.21-201ENST00000580816 167 ntBASIC18.68■□□□□ 0.58
CDK7P50613 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
CDK7P50613 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.68■□□□□ 0.58
CDK7P50613 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDK7P50613 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.68■□□□□ 0.58
CDK7P50613 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK7P50613 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK7P50613 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK7P50613 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK7P50613 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CDK7P50613 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CDK7P50613 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CDK7P50613 HCG11-201ENST00000411553 5696 ntBASIC18.67■□□□□ 0.58
CDK7P50613 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDK7P50613 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK7P50613 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDK7P50613 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CDK7P50613 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CDK7P50613 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK7P50613 OR8S1-201ENST00000310194 1080 ntBASIC18.67■□□□□ 0.58
CDK7P50613 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms