Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CPT1AP50416 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
CPT1AP50416 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPT1AP50416 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CPT1AP50416 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPT1AP50416 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPT1AP50416 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.7■□□□□ 0.58
CPT1AP50416 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.7■□□□□ 0.58
CPT1AP50416 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPT1AP50416 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPT1AP50416 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.7■□□□□ 0.58
CPT1AP50416 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPT1AP50416 MIR661-201ENST00000384842 89 ntBASIC18.7■□□□□ 0.58
CPT1AP50416 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPT1AP50416 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.7■□□□□ 0.58
CPT1AP50416 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CPT1AP50416 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPT1AP50416 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPT1AP50416 KRT18P34-201ENST00000488218 1270 ntBASIC18.7■□□□□ 0.58
CPT1AP50416 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.7■□□□□ 0.58
CPT1AP50416 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.7■□□□□ 0.58
CPT1AP50416 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.7■□□□□ 0.58
CPT1AP50416 LINC02560-201ENST00000596379 459 ntBASIC18.7■□□□□ 0.58
CPT1AP50416 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.7■□□□□ 0.58
CPT1AP50416 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.7■□□□□ 0.58
CPT1AP50416 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.7■□□□□ 0.58
CPT1AP50416 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPT1AP50416 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPT1AP50416 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
CPT1AP50416 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPT1AP50416 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.7■□□□□ 0.58
CPT1AP50416 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CPT1AP50416 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.7■□□□□ 0.58
CPT1AP50416 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPT1AP50416 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPT1AP50416 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.69■□□□□ 0.58
CPT1AP50416 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPT1AP50416 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.69■□□□□ 0.58
CPT1AP50416 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPT1AP50416 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPT1AP50416 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.69■□□□□ 0.58
CPT1AP50416 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.69■□□□□ 0.58
CPT1AP50416 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPT1AP50416 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPT1AP50416 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CPT1AP50416 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPT1AP50416 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPT1AP50416 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPT1AP50416 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPT1AP50416 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPT1AP50416 AC241585.1-201ENST00000433527 519 ntBASIC18.69■□□□□ 0.58
CPT1AP50416 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.69■□□□□ 0.58
CPT1AP50416 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.69■□□□□ 0.58
CPT1AP50416 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.69■□□□□ 0.58
CPT1AP50416 MIR4492-201ENST00000581627 80 ntBASIC18.69■□□□□ 0.58
CPT1AP50416 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.69■□□□□ 0.58
CPT1AP50416 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CPT1AP50416 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
CPT1AP50416 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CPT1AP50416 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPT1AP50416 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.69■□□□□ 0.58
CPT1AP50416 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPT1AP50416 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.69■□□□□ 0.58
CPT1AP50416 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.69■□□□□ 0.58
CPT1AP50416 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPT1AP50416 AC008764.6-201ENST00000595909 2069 ntBASIC18.69■□□□□ 0.58
CPT1AP50416 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.69■□□□□ 0.58
CPT1AP50416 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.69■□□□□ 0.58
CPT1AP50416 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
CPT1AP50416 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPT1AP50416 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.68■□□□□ 0.58
CPT1AP50416 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPT1AP50416 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPT1AP50416 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPT1AP50416 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.68■□□□□ 0.58
CPT1AP50416 LINC00895-201ENST00000629028 1637 ntBASIC18.68■□□□□ 0.58
CPT1AP50416 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPT1AP50416 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPT1AP50416 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.68■□□□□ 0.58
CPT1AP50416 AC142381.1-201ENST00000426099 345 ntBASIC18.68■□□□□ 0.58
CPT1AP50416 AC092580.3-201ENST00000430932 139 ntBASIC18.68■□□□□ 0.58
CPT1AP50416 AC244107.1-201ENST00000442033 332 ntBASIC18.68■□□□□ 0.58
CPT1AP50416 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CPT1AP50416 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CPT1AP50416 RARRES2P9-201ENST00000565168 469 ntBASIC18.68■□□□□ 0.58
CPT1AP50416 AC018529.1-201ENST00000613063 361 ntBASIC18.68■□□□□ 0.58
CPT1AP50416 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.68■□□□□ 0.58
CPT1AP50416 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPT1AP50416 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPT1AP50416 LINC00896-202ENST00000609602 2128 ntBASIC18.68■□□□□ 0.58
CPT1AP50416 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.68■□□□□ 0.58
CPT1AP50416 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPT1AP50416 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.68■□□□□ 0.58
CPT1AP50416 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPT1AP50416 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPT1AP50416 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPT1AP50416 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPT1AP50416 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CPT1AP50416 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPT1AP50416 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms