Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 PAM-203ENST00000346918 3302 ntTSL 5 BASIC11.53□□□□□ -0.56
PCP4P48539 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC11.53□□□□□ -0.56
PCP4P48539 AC046185.3-201ENST00000623228 1824 ntBASIC11.53□□□□□ -0.56
PCP4P48539 OS9-203ENST00000389142 2457 ntTSL 5 BASIC11.53□□□□□ -0.56
PCP4P48539 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 TUSC5-201ENST00000333813 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC11.53□□□□□ -0.56
PCP4P48539 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC11.53□□□□□ -0.56
PCP4P48539 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC11.53□□□□□ -0.56
PCP4P48539 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC11.53□□□□□ -0.56
PCP4P48539 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC11.53□□□□□ -0.56
PCP4P48539 SON-203ENST00000381679 7860 ntTSL 5 BASIC11.53□□□□□ -0.56
PCP4P48539 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC11.53□□□□□ -0.56
PCP4P48539 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC11.53□□□□□ -0.56
PCP4P48539 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 AC136759.1-202ENST00000530858 2194 ntBASIC11.53□□□□□ -0.56
PCP4P48539 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC11.53□□□□□ -0.56
PCP4P48539 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 RNF216P1-203ENST00000404404 2427 ntBASIC11.53□□□□□ -0.56
PCP4P48539 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
PCP4P48539 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC11.53□□□□□ -0.56
PCP4P48539 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
PCP4P48539 TKT-202ENST00000423516 2075 ntTSL 2 BASIC11.53□□□□□ -0.56
PCP4P48539 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC11.53□□□□□ -0.56
PCP4P48539 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
PCP4P48539 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC11.53□□□□□ -0.56
PCP4P48539 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 CCBE1-202ENST00000439986 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PCP4P48539 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
PCP4P48539 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC11.52□□□□□ -0.56
PCP4P48539 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
PCP4P48539 ARHGAP36-203ENST00000370922 2736 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
PCP4P48539 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
PCP4P48539 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PCP4P48539 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
PCP4P48539 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC11.52□□□□□ -0.56
PCP4P48539 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PCP4P48539 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
PCP4P48539 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PCP4P48539 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC11.52□□□□□ -0.57
PCP4P48539 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PCP4P48539 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
PCP4P48539 SUPT20HL1-201ENST00000436466 2618 ntBASIC11.52□□□□□ -0.57
PCP4P48539 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PCP4P48539 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC11.52□□□□□ -0.57
PCP4P48539 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PCP4P48539 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PCP4P48539 CELP-203ENST00000624767 2414 ntTSL 5 BASIC11.52□□□□□ -0.57
PCP4P48539 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
PCP4P48539 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
PCP4P48539 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PCP4P48539 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
PCP4P48539 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC11.52□□□□□ -0.57
PCP4P48539 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
PCP4P48539 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
PCP4P48539 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
PCP4P48539 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC11.52□□□□□ -0.57
PCP4P48539 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
PCP4P48539 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
PCP4P48539 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.51□□□□□ -0.57
PCP4P48539 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.51□□□□□ -0.57
PCP4P48539 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
PCP4P48539 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 AC093677.2-201ENST00000600169 1863 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms